RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 SNAI1O95863 264 aaPredicted RBP24.61■■□□□ 1.53
DDX41-202ENST00000503078 STX1BP61266 288 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 TMED1Q13445 227 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 ACAP2Q15057 778 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 ZNF789Q5FWF6 425 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 PITRM1Q5JRX3 1037 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 PCYOX1LQ8NBM8 494 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 ZUFSPQ96AP4 578 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 PPP1R2P1Q96PQ5 205 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 VPS45Q9NRW7 570 aa24.61■■□□□ 1.53
DDX41-202ENST00000503078 GMPR2Q9P2T1 348 aaKnown RBP24.61■■□□□ 1.53
DDX41-202ENST00000503078 HEMK1Q9Y5R4 338 aaPredicted RBP24.61■■□□□ 1.53
DDX41-202ENST00000503078 UBFD1O14562 309 aaKnown RBP24.6■■□□□ 1.53
DDX41-202ENST00000503078 MAFKO60675 156 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 CLCN5P51795 746 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 PRAMEP78395 509 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 SNX17Q15036 470 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 DUSP28Q4G0W2 176 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 CLEC6AQ6EIG7 209 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 CYHR1Q6ZMK1 362 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 FUNDC1Q8IVP5 155 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 MFSD2AQ8NA29 543 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 SENP8Q96LD8 212 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 TRMOQ9BU70 441 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 CCM2LQ9NUG4 571 aaPredicted RBP24.6■■□□□ 1.53
DDX41-202ENST00000503078 A0A087WXM4 84 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 MT-CO1P00395 513 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 RANBP10Q6VN20 620 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 KDELC2Q7Z4H8 507 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 GPR141Q7Z602 305 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 SMG8Q8ND04 991 aaKnown RBP24.6■■□□□ 1.53
DDX41-202ENST00000503078 FAM110BQ8TC76 370 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 CDCA5Q96FF9 252 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 TSPAN17Q96FV3 270 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 MRGPRX2Q96LB1 330 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 ATXN3LQ9H3M9 355 aa24.6■■□□□ 1.53
DDX41-202ENST00000503078 FBRSL1Q9HCM7 1045 aaKnown RBP24.6■■□□□ 1.53
DDX41-202ENST00000503078 ATP6AP2A0A1C7CYW4 349 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 SAC3D1A6NKF1 404 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 TRIM64CA6NLI5 447 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 PTGESO14684 152 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 ATP6AP2O75787 350 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 HLA-DQB2P05538 268 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 SMIM10L2AP0DMW4 78 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 SMIM10L2BP0DMW5 78 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 IMPDH1P20839 514 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 NUP107P57740 925 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 ESRRGP62508 458 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 PLOD1Q02809 727 aaPredicted RBP24.59■■□□□ 1.53
DDX41-202ENST00000503078 INTS11Q5TA45 600 aaKnown RBP24.59■■□□□ 1.53
DDX41-202ENST00000503078 KLHL35Q6PF15 583 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 CALML6Q8TD86 181 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 UBXN10Q96LJ8 280 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 SIK2Q9H0K1 926 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 PTBP2Q9UKA9 531 aaKnown RBP24.59■■□□□ 1.53
DDX41-202ENST00000503078 BBIP1A8MTZ0 92 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 GPX3P22352 226 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 LEPRP48357 1165 aaKnown RBP24.59■■□□□ 1.53
DDX41-202ENST00000503078 LHX1P48742 406 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 SCNN1BP51168 640 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 SLC14A2Q15849 920 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 RETREG3Q86VR2 466 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 CAMK1DQ8IU85 385 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 MIPOL1Q8TD10 442 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 DNAJB3Q8WWF6 145 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 ABTB1Q969K4 478 aaPredicted RBP24.59■■□□□ 1.53
DDX41-202ENST00000503078 GPATCH1Q9BRR8 931 aaKnown RBP24.59■■□□□ 1.53
DDX41-202ENST00000503078 SPON1Q9HCB6 807 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 PTCH2Q9Y6C5 1203 aa24.59■■□□□ 1.53
DDX41-202ENST00000503078 BPTFQ12830 3046 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 CYP2C18P33260 490 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 NME5P56597 212 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 TBCELQ5QJ74 424 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 CROCCP3Q8IVE0 287 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 CBR4Q8N4T8 237 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 ANKRD49Q8WVL7 239 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 PPP1R14BQ96C90 147 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 SLC39A8Q9C0K1 460 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 RBM22Q9NW64 420 aaKnown RBP eCLIP24.58■■□□□ 1.53
DDX41-202ENST00000503078 SMOXQ9NWM0 555 aa24.58■■□□□ 1.53
DDX41-202ENST00000503078 AQP12BA6NM10 295 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 ALDOCP09972 364 aaKnown RBP24.58■■□□□ 1.52
DDX41-202ENST00000503078 MYF6P23409 242 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 RPL10P27635 214 aaKnown RBP24.58■■□□□ 1.52
DDX41-202ENST00000503078 ZBED5Q49AG3 693 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 FAM219BQ5XKK7 198 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 CLVS1Q8IUQ0 354 aaPredicted RBP24.58■■□□□ 1.52
DDX41-202ENST00000503078 AQP12AQ8IXF9 295 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 FNDC8Q8TC99 324 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 C19orf60Q96EN9 201 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 PPP1R10Q96QC0 940 aaKnown RBP24.58■■□□□ 1.52
DDX41-202ENST00000503078 TRIM15Q9C019 465 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 CACNG4Q9UBN1 327 aa24.58■■□□□ 1.52
DDX41-202ENST00000503078 FAF1Q9UNN5 650 aaPredicted RBP24.58■■□□□ 1.52
DDX41-202ENST00000503078 NME4O00746 187 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 DLGAP1O14490 977 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 SUPT7LO94864 414 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 HECTD2Q5U5R9 776 aa24.57■■□□□ 1.52
DDX41-202ENST00000503078 TTC33Q6PID6 262 aaPredicted RBP24.57■■□□□ 1.52
DDX41-202ENST00000503078 ZNF786Q8N393 782 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms