RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PRR23CQ6ZRP0 262 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 FAM71DQ8N9W8 422 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 CXorf40AQ8TE69 158 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 KLK6Q92876 244 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 OXNAD1Q96HP4 312 aaPredicted RBP25.23■■□□□ 1.63
LSM6-202ENST00000502781 SLC6A18Q96N87 628 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 LENG8Q96PV6 779 aaPredicted RBP25.23■■□□□ 1.63
LSM6-202ENST00000502781 KLF6Q99612 283 aaPredicted RBP25.23■■□□□ 1.63
LSM6-202ENST00000502781 GORASP1Q9BQQ3 440 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 TMEM121Q9BTD3 319 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 FAM153AQ9UHL3 310 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 KNL1Q8NG31 2342 aa25.23■■□□□ 1.63
LSM6-202ENST00000502781 DOCK9Q9BZ29 2069 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 A0A1W2PR77 199 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 SLC31A1O15431 190 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 GCATO75600 419 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 HNRNPA2B1P22626 353 aaKnown RBP25.22■■□□□ 1.63
LSM6-202ENST00000502781 NFKBIAP25963 317 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 HOXD11P31277 338 aaPredicted RBP25.22■■□□□ 1.63
LSM6-202ENST00000502781 STIP1P31948 543 aaKnown RBP25.22■■□□□ 1.63
LSM6-202ENST00000502781 GDF10P55107 478 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 AGERQ15109 404 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 LONRF2Q1L5Z9 754 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 RALGAPA1Q6GYQ0 2036 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 KDELC1Q6UW63 502 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 LIPIQ6XZB0 460 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 CBARPQ8N350 705 aaPredicted RBP25.22■■□□□ 1.63
LSM6-202ENST00000502781 C17orf53Q8N3J3 647 aaPredicted RBP25.22■■□□□ 1.63
LSM6-202ENST00000502781 COG1Q8WTW3 980 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 LYSMD1Q96S90 227 aa25.22■■□□□ 1.63
LSM6-202ENST00000502781 WRAP53Q9BUR4 548 aaKnown RBP25.22■■□□□ 1.63
LSM6-202ENST00000502781 NPIPB15A6NHN6 443 aaPredicted RBP25.21■■□□□ 1.63
LSM6-202ENST00000502781 FANCGO15287 622 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 TM7SF2O76062 418 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 PAK4O96013 591 aaPredicted RBP25.21■■□□□ 1.63
LSM6-202ENST00000502781 CFIP05156 583 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 C6P13671 934 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 VIPR1P32241 457 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 LIG3P49916 1009 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 SEMG2Q02383 582 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 CDK18Q07002 472 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 PAPD7Q5XG87 772 aaKnown RBP25.21■■□□□ 1.63
LSM6-202ENST00000502781 USP45Q70EL2 814 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 KLHDC8BQ8IXV7 354 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 NDUFAF2Q8N183 169 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 CCDC110Q8TBZ0 833 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 RSPH14Q9UHP6 348 aa25.21■■□□□ 1.63
LSM6-202ENST00000502781 LNP1A1A4G5 178 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 ANKRD66B4E2M5 251 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 RAD51BO15315 384 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 WNT1P04628 370 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 ITGAVP06756 1048 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 GM2AP17900 193 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 LHCGRP22888 699 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 CSNK1EP49674 416 aaKnown RBP25.2■■□□□ 1.63
LSM6-202ENST00000502781 SGCGQ13326 291 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 MPP3Q13368 585 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 PTPRRQ15256 657 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 QPCTQ16769 361 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 IQCHQ86VS3 1027 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 PRELID2Q8N945 189 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 DENND6BQ8NEG7 585 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 LPCAT1Q8NF37 534 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 CENPTQ96BT3 561 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 MS4A14Q96JA4 679 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 SMIM14Q96QK8 99 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 NUSAP1Q9BXS6 441 aaKnown RBP25.2■■□□□ 1.63
LSM6-202ENST00000502781 UBP1Q9NZI7 540 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 DRG1Q9Y295 367 aaKnown RBP25.2■■□□□ 1.63
LSM6-202ENST00000502781 HS3ST3A1Q9Y663 406 aa25.2■■□□□ 1.63
LSM6-202ENST00000502781 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.2■■□□□ 1.63
LSM6-202ENST00000502781 PLXNA2O75051 1894 aa25.2■■□□□ 1.62
LSM6-202ENST00000502781 LOC285095A0A1B0GVY8 99 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 CAPN8A6NHC0 703 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 VILLO15195 856 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 HEXIM1O94992 359 aaKnown RBP25.19■■□□□ 1.62
LSM6-202ENST00000502781 EPOP01588 193 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 ALPIP09923 528 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 CYP2A6P11509 494 aaPredicted RBP25.19■■□□□ 1.62
LSM6-202ENST00000502781 TCP1P17987 556 aaKnown RBP25.19■■□□□ 1.62
LSM6-202ENST00000502781 CD38P28907 300 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 AKT2P31751 481 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 HNF1BP35680 557 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 EPHB1P54762 984 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 WNT3AP56704 352 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 BNC1Q01954 994 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 CNGA3Q16281 694 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 HS1BP3Q53T59 392 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 MFSD2AQ8NA29 543 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 ACTRT1Q8TDG2 376 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 MRGPRX2Q96LB1 330 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 ADGRE3Q9BY15 652 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 FZD3Q9NPG1 666 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 AASDHPPTQ9NRN7 309 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 HOMER3Q9NSC5 361 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 PCDH15Q96QU1 1955 aa25.19■■□□□ 1.62
LSM6-202ENST00000502781 PMPCBO75439 489 aa25.18■■□□□ 1.62
LSM6-202ENST00000502781 ANXA9O76027 345 aa25.18■■□□□ 1.62
LSM6-202ENST00000502781 ELFN1P0C7U0 828 aa25.18■■□□□ 1.62
LSM6-202ENST00000502781 CTPS1P17812 591 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms