RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 NADKO95544 446 aaPredicted RBP11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 BUD31P41223 144 aaPredicted RBP11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 ADAM17P78536 824 aa11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 HSD17B12Q53GQ0 312 aa11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 TREML1Q86YW5 311 aa11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 STAG3L4Q8TBR4 150 aa11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 IPCEF1Q8WWN9 437 aaPredicted RBP11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
AC055713.1-201ENST00000498967 HHLA1C9JL84 531 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 OGTO15294 1046 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 NPTXRO95502 500 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 APLP1P51693 650 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 RAB5BP61020 215 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 GRAPQ13588 217 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 GOLGA7BQ2TAP0 167 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 GLRA4Q5JXX5 417 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 FAXCQ5TGI0 409 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 HAGHLQ6PII5 290 aaPredicted RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 ILDR2Q71H61 639 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 SELENOMQ8WWX9 145 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 LPAR1Q92633 364 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 RBM12Q9NTZ6 932 aaKnown RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 C14orf105Q9NVL8 296 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 SOHLH2Q9NX45 425 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 ZSCAN5CA6NGD5 496 aaPredicted RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 HCN1O60741 890 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 DNAJA2O60884 412 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 SAGP10523 405 aaPredicted RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 SLC6A4P31645 630 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 DLSTP36957 453 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 PABPC1LQ4VXU2 614 aaKnown RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 CRTC3Q6UUV7 619 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 ARSKQ6UWY0 536 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 TTC7BQ86TV6 843 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 WDR49Q8IV35 697 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 TBC1D21Q8IYX1 336 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 WRNIP1Q96S55 665 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 ZSCAN5AQ9BUG6 496 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 TREM1Q9NP99 234 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 OGDHLQ9ULD0 1010 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 PCDHGB6Q9Y5F9 930 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 TM7SF2O76062 418 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 CCNDBP1O95273 360 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 LHX1P48742 406 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 FASTKD3Q14CZ7 662 aaKnown RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 TTI2Q6NXR4 508 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 SLCO6A1Q86UG4 719 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 ASB12Q8WXK4 309 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 NUDT15Q9NV35 164 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 GHRLQ9UBU3 117 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 SEC24CP53992 1094 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 CYP4X1Q8N118 509 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 RBM4BQ9BQ04 359 aaKnown RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 RBM4Q9BWF3 364 aaKnown RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 MROH8Q9H579 483 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 RNPEPL1Q9HAU8 725 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 ZC3H11AO75152 810 aaKnown RBP eCLIP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 UBOX5O94941 541 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 GH2P01242 217 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 IFNA1P01562 189 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 NCK1P16333 377 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 MAD2L1BPQ15013 274 aaPredicted RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 MAPK14Q16539 360 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 TXNRD1Q16881 649 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 KCNK18Q7Z418 384 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 SNX33Q8WV41 574 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 CIPCQ9C0C6 399 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 OR6C6A6NF89 314 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 IGSF6O95976 241 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 HOXC6P09630 235 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 IDO1P14902 403 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 CFL1P23528 166 aaKnown RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 MAGEA8P43361 318 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 SPIBQ01892 262 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 CBWD6Q4V339 395 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 BEND7Q8N7W2 519 aaPredicted RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 FBXO36Q8NEA4 188 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 C9orf43Q8TAL5 461 aaPredicted RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 PHF21BQ96EK2 531 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 VAT1Q99536 393 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 KLF6Q99612 283 aaPredicted RBP11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 FUT8Q9BYC5 575 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 GIN1Q9NXP7 522 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 IKZF2Q9UKS7 526 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 PADI2Q9Y2J8 665 aa11.23□□□□□ -0.61
AC055713.1-201ENST00000498967 URODP06132 367 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SNRPB2P08579 225 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 AMD1P17707 334 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 HTR1BP28222 390 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SPDYCQ5MJ68 293 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ZYG11BQ9C0D3 744 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 GULP1Q9UBP9 304 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 MTF2Q9Y483 593 aaPredicted RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SCAF4O95104 1147 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 LHCGRP22888 699 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms