RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 POLR3GO15318 223 aaPredicted RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 TSPAN3O60637 253 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 FAM155BO75949 473 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 USP1O94782 785 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 PENKP01210 267 aaPredicted RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 CYBBP04839 570 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 POLBP06746 335 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 MMP2P08253 660 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 GJA1P17302 382 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 NR1D1P20393 614 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 MGAT1P26572 445 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 ARNTP27540 789 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SLCO1A2P46721 670 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 NRIP1P48552 1158 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 ARL4DP49703 201 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 MAGOHP61326 146 aaKnown RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 GABPB1Q06547 395 aaPredicted RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 NSUN2Q08J23 767 aaKnown RBP eCLIP7.74□□□□□ -1.17
CDC42-205ENST00000498236 NIPAL4Q0D2K0 466 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 CDH18Q13634 790 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SPARCL1Q14515 664 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 ZNF235Q14590 738 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 LRRC14Q15048 493 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SPANXN3Q5MJ09 141 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SNAP47Q5SQN1 464 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 RNF219Q5W0B1 726 aaPredicted RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 KCTD16Q68DU8 428 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 IL31Q6EBC2 164 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 DENND5AQ6IQ26 1287 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 TAOK1Q7L7X3 1001 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 GRASPQ7Z6J2 395 aaPredicted RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 RBM23Q86U06 439 aaKnown RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 ALYREFQ86V81 257 aaKnown RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 MPP5Q8N3R9 675 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 PGBD5Q8N414 524 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SH2D3CQ8N5H7 860 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 DNAAF3Q8N9W5 541 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 DCAF4L2Q8NA75 395 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 OR52K1Q8NGK4 314 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SPATA22Q8NHS9 363 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SLC44A1Q8WWI5 657 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SMG7Q92540 1137 aaKnown RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 ALG14Q96F25 216 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 LMLNQ96KR4 655 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 KIFC1Q9BW19 673 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 CENPHQ9H3R5 247 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 CNOT10Q9H9A5 744 aaKnown RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 MRM3Q9HC36 420 aaKnown RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 NT5MQ9NPB1 228 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SYBUQ9NX95 663 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 PSD3Q9NYI0 1048 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SAMD15Q9P1V8 674 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 PSMC3IPQ9P2W1 217 aaPredicted RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 UBA2Q9UBT2 640 aaPredicted RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 CYP8B1Q9UNU6 501 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 CCL26Q9Y258 94 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 MAD1L1Q9Y6D9 718 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 LAMA2P24043 3122 aaKnown RBP7.74□□□□□ -1.17
CDC42-205ENST00000498236 SHROOM3Q8TF72 1996 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.73□□□□□ -1.17
CDC42-205ENST00000498236 LOC285095A0A1B0GVY8 99 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 EPOPA6NHQ4 379 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 SHISA8B8ZZ34 492 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 F5H423 210 aaPredicted RBP7.73□□□□□ -1.17
CDC42-205ENST00000498236 LINC01387J3KSC0 135 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 MUSKO15146 869 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 SHOX2O60902 331 aaPredicted RBP7.73□□□□□ -1.17
CDC42-205ENST00000498236 USP12O75317 370 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 CSPG5O95196 566 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 PRAMEF12O95522 483 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 MT-CYBP00156 380 aaPredicted RBP7.73□□□□□ -1.17
CDC42-205ENST00000498236 SERPINF2P08697 491 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 CEBPBP17676 345 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 CR2P20023 1033 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 DNAJA1P31689 397 aaKnown RBP7.73□□□□□ -1.17
CDC42-205ENST00000498236 MSH2P43246 934 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 SLC18A1P54219 525 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 WNT3AP56704 352 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 SESN2P58004 480 aaPredicted RBP7.73□□□□□ -1.17
CDC42-205ENST00000498236 PPP2R2AP63151 447 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 NTHL1P78549 312 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 ARF5P84085 180 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 SLC20A2Q08357 652 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 C19orf57Q0VDD7 668 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 MTM1Q13496 603 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 CRYMQ14894 314 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 CYTH1Q15438 398 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 KBTBD12Q3ZCT8 623 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 FSCBQ5H9T9 825 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 PCID2Q5JVF3 399 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 FBXL19Q6PCT2 694 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 C8orf86Q6ZUL3 223 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 TRABD2AQ86V40 505 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 EXOC3L1Q86VI1 746 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 SLC26A11Q86WA9 606 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 LRRC6Q86X45 466 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 ZNF354CQ86Y25 554 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 MFN1Q8IWA4 741 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 TDHQ8IZJ6 230 aa7.73□□□□□ -1.17
CDC42-205ENST00000498236 CARNMT1Q8N4J0 409 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms