RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MGME1Q9BQP7 344 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 TMEM121BQ9BXQ6 578 aaPredicted RBP15.43■□□□□ 0.06
NUP50-219ENST00000497960 UCKL1Q9NWZ5 548 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 LRRD1A4D1F6 860 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 CFAP69A5D8W1 941 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 TRAFD1O14545 582 aaPredicted RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 FFAR2O15552 330 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 SIGLEC6O43699 453 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 MFSD11O43934 449 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 FTCDO95954 541 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 CSF2P04141 144 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 PRKCGP05129 697 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 NME1P15531 152 aaKnown RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 JUNDP17535 347 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 NFKBIAP25963 317 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 MMP12P39900 470 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 GARSP41250 739 aaKnown RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 LIG3P49916 1009 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 DAB2P98082 770 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 ILKQ13418 452 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 PAFAH1B3Q15102 231 aaKnown RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 IRF4Q15306 451 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 RALGPS1Q5JS13 557 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 LRRC38Q5VT99 294 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 NCBP2-AS2Q69YL0 99 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 TIGD7Q6NT04 549 aaPredicted RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 PEX26Q7Z412 305 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 LRRC57Q8N9N7 239 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 TP53I13Q8NBR0 393 aaPredicted RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 OR4C6Q8NH72 309 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 PCDH19Q8TAB3 1148 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 MBNL1Q9NR56 388 aaKnown RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 HAUS2Q9NVX0 235 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 TRMT1Q9NXH9 659 aaKnown RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 DDX56Q9NY93 547 aaKnown RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 AMFRQ9UKV5 643 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 COQ6Q9Y2Z9 468 aa15.42■□□□□ 0.06
NUP50-219ENST00000497960 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.42■□□□□ 0.06
NUP50-219ENST00000497960 COL5A1P20908 1838 aaPredicted RBP15.42■□□□□ 0.06
NUP50-219ENST00000497960 TTC24A2A3L6 582 aaPredicted RBP15.41■□□□□ 0.06
NUP50-219ENST00000497960 TRIM38O00635 465 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 SCAMP1O15126 338 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 SOCS5O75159 536 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 NEBLO76041 1014 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 ELFN1P0C7U0 828 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 CR2P20023 1033 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 MX2P20592 715 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 ACADVLP49748 655 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 SEMG2Q02383 582 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 GALNT2Q10471 571 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 SMAD1Q15797 465 aaKnown RBP15.41■□□□□ 0.06
NUP50-219ENST00000497960 WSCD2Q2TBF2 565 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 PROX2Q3B8N5 592 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 KDM7AQ6ZMT4 941 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 DPPA4Q7L190 304 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 TMPRSS12Q86WS5 348 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 PGBD5Q8N414 524 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 KDF1Q8NAX2 398 aaPredicted RBP15.41■□□□□ 0.06
NUP50-219ENST00000497960 PDCD6IPQ8WUM4 868 aaKnown RBP15.41■□□□□ 0.06
NUP50-219ENST00000497960 BTN2A2Q8WVV5 523 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 FAF2Q96CS3 445 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 TRIM44Q96DX7 344 aaPredicted RBP15.41■□□□□ 0.06
NUP50-219ENST00000497960 DUSP23Q9BVJ7 150 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 NOD2Q9HC29 1040 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 NT5MQ9NPB1 228 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 EVA1BQ9NVM1 165 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 NLGN3Q9NZ94 848 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 PCDHGC4Q9Y5F7 938 aa15.41■□□□□ 0.06
NUP50-219ENST00000497960 HTRA2O43464 458 aaPredicted RBP15.4■□□□□ 0.06
NUP50-219ENST00000497960 KDELR1P24390 212 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 CTNNA2P26232 953 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 HTR1BP28222 390 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 CTNNA1P35221 906 aaKnown RBP15.4■□□□□ 0.06
NUP50-219ENST00000497960 MARCKSL1P49006 195 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 PEX5P50542 639 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 MAXP61244 160 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 ITKQ08881 620 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 EIF2B5Q13144 721 aaKnown RBP15.4■□□□□ 0.06
NUP50-219ENST00000497960 AGERQ15109 404 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 TPRG1LQ5T0D9 272 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 MACC1Q6ZN28 852 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 NT5DC3Q86UY8 548 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 CCDC50Q8IVM0 306 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 TEX26Q8N6G2 289 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 ZNF548Q8NEK5 533 aaPredicted RBP15.4■□□□□ 0.06
NUP50-219ENST00000497960 TRIM58Q8NG06 486 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.4■□□□□ 0.06
NUP50-219ENST00000497960 ZCCHC14Q8WYQ9 949 aaKnown RBP15.4■□□□□ 0.06
NUP50-219ENST00000497960 SPOCK2Q92563 424 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 RAPGEF5Q92565 580 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 MAK16Q9BXY0 300 aaKnown RBP15.4■□□□□ 0.06
NUP50-219ENST00000497960 SLC13A1Q9BZW2 595 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 SPASTQ9UBP0 616 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 CSNK1G3Q9Y6M4 447 aa15.4■□□□□ 0.06
NUP50-219ENST00000497960 SHROOM3Q8TF72 1996 aa15.39■□□□□ 0.05
NUP50-219ENST00000497960 CCDC66A2RUB6 948 aa15.39■□□□□ 0.05
NUP50-219ENST00000497960 GOLGA6L9A6NEM1 432 aa15.39■□□□□ 0.05
NUP50-219ENST00000497960 K7ESM1 405 aa15.39■□□□□ 0.05
NUP50-219ENST00000497960 MATN3O15232 486 aa15.39■□□□□ 0.05
NUP50-219ENST00000497960 AQP9O43315 295 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms