RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 TRIP6Q15654 476 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 TAZQ16635 292 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 ZFYVE27Q5T4F4 411 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 MARC1Q5VT66 337 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 KDM7AQ6ZMT4 941 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 Q6ZSR6 202 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 KANSL1Q7Z3B3 1105 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 GLRX5Q86SX6 157 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 SLC22A18ASQ8N1D0 253 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 RASGEF1CQ8N431 466 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 COG1Q8WTW3 980 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 CAPZA3Q96KX2 299 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 CAAP1Q9H8G2 361 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 PGRMC1O00264 195 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 MMP12P39900 470 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 CETN2P41208 172 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 PFN3P60673 137 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 ELP6Q0PNE2 266 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 BNIP3Q12983 259 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 ALG1LQ6GMV1 187 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 MFSD7Q6UXD7 560 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 KYAT3Q6YP21 454 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 GATAD2AQ86YP4 633 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 DENND6BQ8NEG7 585 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 FAM174AQ8TBP5 190 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 RHBDD1Q8TEB9 315 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 SETD7Q8WTS6 366 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 NSMCE1Q8WV22 266 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 WRAP53Q9BUR4 548 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 PACSIN2Q9UNF0 486 aaPredicted RBP16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 ATP8A1Q9Y2Q0 1164 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 PCDHGC4Q9Y5F7 938 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 PLXNA2O75051 1894 aa16.07■□□□□ 0.16
CTDSP1-214ENST00000497677 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 A6NNZ2 444 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 ZNF185O15231 689 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 YKT6O15498 198 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 CEP104O60308 925 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 TM7SF2O76062 418 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 KRT1P04264 644 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 XPAP23025 273 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 EPHA8P29322 1005 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 CXCR5P32302 372 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 CDKN2BP42772 138 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 ARRB1P49407 418 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 PEX5P50542 639 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 SHC2P98077 582 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 SEMG2Q02383 582 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 TRAF2Q12933 501 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 RALGDSQ12967 914 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 RALGPS1Q5JS13 557 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 TPRG1LQ5T0D9 272 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 SEL1L2Q5TEA6 688 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 BBS5Q8N3I7 341 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 OXR1Q8N573 874 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 CXorf40AQ8TE69 158 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 MAIP1Q8WWC4 291 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 HDAC11Q96DB2 347 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 NT5MQ9NPB1 228 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 SCUBE2Q9NQ36 999 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 MBNL1Q9NR56 388 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 DDX56Q9NY93 547 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
CTDSP1-214ENST00000497677 GOLGA6L10A0A0M3HER8 536 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 CFAP69A5D8W1 941 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 CCDC188H7C350 402 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 SOCS5O75159 536 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 TOP3BO95985 862 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 CCNB1P14635 433 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 MX2P20592 715 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 MCM3P25205 808 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 IGFALSP35858 605 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 GRK6P43250 576 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 LIG3P49916 1009 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 PPIDQ08752 370 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 FZD2Q14332 565 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 AGERQ15109 404 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 WSCD2Q2TBF2 565 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 GLE1Q53GS7 698 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 CFAP58Q5T655 872 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 TIGD7Q6NT04 549 aaPredicted RBP16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 SLCO6A1Q86UG4 719 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 DCP2Q8IU60 420 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 SLC25A45Q8N413 288 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 MMGT1Q8N4V1 131 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 SPATA4Q8NEY3 305 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 ARRDC2Q8TBH0 407 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 OLFM3Q96PB7 478 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 LGMNQ99538 433 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 CDC6Q99741 560 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 RBM22Q9NW64 420 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 TOR4AQ9NXH8 423 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 COQ6Q9Y2Z9 468 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 PCDHB9Q9Y5E1 797 aa16.05■□□□□ 0.16
CTDSP1-214ENST00000497677 SPTY2D1-AS1A0A0U1RR47 76 aa16.04■□□□□ 0.16
CTDSP1-214ENST00000497677 FPGTO14772 594 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms