RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 IFT43Q96FT9 208 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 CELF6Q96J87 481 aaKnown RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 HIC2Q96JB3 615 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 PEBP4Q96S96 227 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 SYT11Q9BT88 431 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 LRRC61Q9BV99 259 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 TTYH3Q9C0H2 523 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 IPO11Q9UI26 975 aaKnown RBP15.3■□□□□ 0.04
TNRC18-210ENST00000497663 PCDHGC4Q9Y5F7 938 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 ZNF462Q96JM2 2506 aa15.3■□□□□ 0.04
TNRC18-210ENST00000497663 ATXN7O15265 892 aaPredicted RBP15.29■□□□□ 0.04
TNRC18-210ENST00000497663 ZNF143P52747 638 aaPredicted RBP15.29■□□□□ 0.04
TNRC18-210ENST00000497663 PDX1P52945 283 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 RHOAP61586 193 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 HNRNPKP61978 463 aaKnown RBP eCLIP15.29■□□□□ 0.04
TNRC18-210ENST00000497663 GABREP78334 506 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 SERINC3Q13530 473 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 IRF4Q15306 451 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 KLHL40Q2TBA0 621 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 WSCD2Q2TBF2 565 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 FKBP15Q5T1M5 1219 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 E4F1Q66K89 784 aaPredicted RBP15.29■□□□□ 0.04
TNRC18-210ENST00000497663 TRIM72Q6ZMU5 477 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 SLC35F3Q8IY50 421 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 MAPK15Q8TD08 544 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 ATXN7L3BQ96GX2 97 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 PRR11Q96HE9 360 aaPredicted RBP15.29■□□□□ 0.04
TNRC18-210ENST00000497663 FCRL3Q96P31 734 aaPredicted RBP15.29■□□□□ 0.04
TNRC18-210ENST00000497663 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.29■□□□□ 0.04
TNRC18-210ENST00000497663 LRRC19Q9H756 370 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 PDFQ9HBH1 243 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 ASCL3Q9NQ33 180 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 MFHAS1Q9Y4C4 1052 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 KIF26BQ2KJY2 2108 aa15.29■□□□□ 0.04
TNRC18-210ENST00000497663 TMCO5BA8MYB1 307 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 MUSKO15146 869 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 YY2O15391 372 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 TSHRP16473 764 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 EIF4A3P38919 411 aaKnown RBP15.28■□□□□ 0.04
TNRC18-210ENST00000497663 UBXN1Q04323 297 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 UBAP2LQ14157 1087 aaKnown RBP15.28■□□□□ 0.04
TNRC18-210ENST00000497663 ISXQ2M1V0 245 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 PRRT3Q5FWE3 981 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 SAMD5Q5TGI4 173 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 DNAJC24Q6P3W2 148 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 CYP4V2Q6ZWL3 525 aaPredicted RBP15.28■□□□□ 0.04
TNRC18-210ENST00000497663 IRF2BP2Q7Z5L9 587 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 DCP2Q8IU60 420 aaKnown RBP15.28■□□□□ 0.04
TNRC18-210ENST00000497663 PHACTR4Q8IZ21 702 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 MCOLN2Q8IZK6 566 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 PELI3Q8N2H9 469 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 NEK11Q8NG66 645 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 ASB12Q8WXK4 309 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 TSACCQ96A04 125 aaPredicted RBP15.28■□□□□ 0.04
TNRC18-210ENST00000497663 RAB7BQ96AH8 199 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 HSH2DQ96JZ2 352 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 GDAP1L1Q96MZ0 367 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 SLC39A8Q9C0K1 460 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 CPNE5Q9HCH3 593 aa15.28■□□□□ 0.04
TNRC18-210ENST00000497663 SETXQ7Z333 2677 aaKnown RBP15.27■□□□□ 0.04
TNRC18-210ENST00000497663 WASH4PA8MWX3 477 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 CALB1P05937 261 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 ALPPL2P10696 532 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 GMPRP36959 345 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 ETFBP38117 255 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 LCE2CQ5TA81 110 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 ZCCHC8Q6NZY4 707 aaKnown RBP15.27■□□□□ 0.04
TNRC18-210ENST00000497663 C16orf46Q6P387 395 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 CAMK1DQ8IU85 385 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 UMODL1-AS1Q8N2C9 162 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 NPWQ8N729 165 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 PLA2G15Q8NCC3 412 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 DENND6BQ8NEG7 585 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 ERGIC2Q96RQ1 377 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 BOCQ9BWV1 1114 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 PCDH12Q9NPG4 1184 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 TMEM51Q9NW97 253 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 APOBEC3BQ9UH17 382 aaKnown RBP15.27■□□□□ 0.04
TNRC18-210ENST00000497663 ATXN7L1Q9ULK2 861 aaPredicted RBP15.27■□□□□ 0.04
TNRC18-210ENST00000497663 HPCAL4Q9UM19 191 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 SATB2Q9UPW6 733 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 OR1A2Q9Y585 309 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 ENTPD2Q9Y5L3 495 aa15.27■□□□□ 0.04
TNRC18-210ENST00000497663 SHROOM3Q8TF72 1996 aa15.27■□□□□ 0.03
TNRC18-210ENST00000497663 LRRK1Q38SD2 2015 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 CXorf51AA0A1B0GTR3 108 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 EME2A4GXA9 379 aaPredicted RBP15.26■□□□□ 0.03
TNRC18-210ENST00000497663 NEMP2A6NFY4 417 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 LRRC10BA6NIK2 292 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 RRP8O43159 456 aaKnown RBP15.26■□□□□ 0.03
TNRC18-210ENST00000497663 TM7SF2O76062 418 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 IGSF6O95976 241 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 GP1BAP07359 652 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 KRT10P13645 584 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 TCF4P15884 667 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 GM2AP17900 193 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 ACTN2P35609 894 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 PAPOLAP51003 745 aaKnown RBP15.26■□□□□ 0.03
TNRC18-210ENST00000497663 CXADRP78310 365 aa15.26■□□□□ 0.03
TNRC18-210ENST00000497663 MYL5Q02045 173 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms