RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 NDFIP2Q9NV92 336 aa16.68■□□□□ 0.26
SUPT20H-223ENST00000497318 SPTBN1Q01082 2364 aaKnown RBP16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 GTPBP10A4D1E9 387 aaKnown RBP16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 B4GAT1O43505 415 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 HOXC4P09017 264 aaPredicted RBP16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 LIFP15018 202 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 BMP6P22004 513 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 CDH5P33151 784 aaPredicted RBP16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 CSTF2P33240 577 aaKnown RBP eCLIP16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 UGT1A3P35503 534 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 CLCN1P35523 988 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 ATP11AP98196 1134 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 BRAT1Q6PJG6 821 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 TMPRSS9Q7Z410 1059 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 BNIPLQ7Z465 357 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 OR1E3Q8WZA6 343 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 ZNF641Q96N77 438 aaPredicted RBP16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 DPYSL5Q9BPU6 564 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 DDA1Q9BW61 102 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 TMEM168Q9H0V1 697 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 SUV39H2Q9H5I1 410 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 DNAJC12Q9UKB3 198 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 BSNQ9UPA5 3926 aa16.67■□□□□ 0.26
SUPT20H-223ENST00000497318 CFAP69A5D8W1 941 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 TMEM202A6NGA9 273 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 GADD45BO75293 160 aaPredicted RBP16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 LSM8O95777 96 aaKnown RBP16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 FGF3P11487 239 aaPredicted RBP16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 PON1P27169 355 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 STAT1P42224 750 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 GPR3P46089 330 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 OR1D5P58170 312 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 APBA1Q02410 837 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 PEX6Q13608 980 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 MANEALQ5VSG8 457 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 FAM71AQ8IYT1 594 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 CYP4F12Q9HCS2 524 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 ZNF71Q9NQZ8 489 aaPredicted RBP16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 SLC39A1Q9NY26 324 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 MOSPD1Q9UJG1 213 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 TMEM59LQ9UK28 342 aa16.66■□□□□ 0.26
SUPT20H-223ENST00000497318 IGHV5-10-1A0A0J9YXX1 117 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 LRIG2O94898 1065 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 PLEKP08567 350 aaPredicted RBP16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 RAB15P59190 212 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 SEPT6Q14141 434 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 DCAF12Q5T6F0 453 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 ZNF438Q7Z4V0 828 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 DNAAF5Q86Y56 855 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 RCBTB1Q8NDN9 531 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 OR4D9Q8NGE8 314 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 APOBEC4Q8WW27 367 aaKnown RBP16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 ART4Q93070 314 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 FUBP1Q96AE4 644 aaKnown RBP16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 SLC45A3Q96JT2 553 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 CCDC74BQ96LY2 380 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 NUDT22Q9BRQ3 303 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 GSDMCQ9BYG8 508 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 FGF22Q9HCT0 170 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 CREBBPQ92793 2442 aa16.65■□□□□ 0.26
SUPT20H-223ENST00000497318 UTP20O75691 2785 aaKnown RBP16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 TSPAN11A1L157 253 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 BLACEA4D250 179 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 SDC4P31431 198 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 MAN1A1P33908 653 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 MMP12P39900 470 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 LIMK2P53671 638 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 YBEYP58557 167 aaPredicted RBP16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 MC1RQ01726 317 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 ILF3Q12906 894 aaKnown RBP eCLIP16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 NYAP1Q6ZVC0 841 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 PAF1Q8N7H5 531 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 PLA2G15Q8NCC3 412 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 ZDHHC1Q8WTX9 485 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 TEFMQ96QE5 360 aaKnown RBP16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 WDR26Q9H7D7 661 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 GPN2Q9H9Y4 310 aaPredicted RBP16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 MRPL40Q9NQ50 206 aaKnown RBP16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 B3GALT1Q9Y5Z6 326 aa16.64■□□□□ 0.25
SUPT20H-223ENST00000497318 RP1L1Q8IWN7 2480 aaPredicted RBP16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 B4E171 279 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 BIN1O00499 593 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 INSIG1O15503 277 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 RAD1O60671 282 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 RECQL5O94762 991 aaPredicted RBP16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 PIGNO95427 931 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 CCNB1P14635 433 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 CYP11B1P15538 503 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 MAP4P27816 1152 aaKnown RBP16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 CD1CP29017 333 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 TRIM23P36406 574 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 TSPAN7P41732 249 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 NOP2P46087 812 aaKnown RBP16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 POLR2LP62875 67 aaKnown RBP16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 RAPGEF1Q13905 1077 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 NR1D2Q14995 579 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 CDO1Q16878 200 aa16.63■□□□□ 0.25
SUPT20H-223ENST00000497318 PARP15Q460N3 678 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms