RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 TMEM51Q9NW97 253 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 ABI3Q9P2A4 366 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 AAR2Q9Y312 384 aaKnown RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 ADAM18Q9Y3Q7 739 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 FAM237AA0A1B0GTK4 181 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 A0A1B0GVT2 93 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 HMGB1P1B2RPK0 211 aaPredicted RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 RGS14O43566 566 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 TIPRLO75663 272 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 NDUFB4O95168 129 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 TOMM40O96008 361 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 CRYABP02511 175 aaKnown RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 CHATP28329 748 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 MLH1P40692 756 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 ROR2Q01974 943 aaKnown RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 GPS2Q13227 327 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 HNF4GQ14541 408 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 DRAP1Q14919 205 aaPredicted RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 NCEH1Q6PIU2 408 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 IKBIPQ70UQ0 350 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 LINGO2Q7L985 606 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 SLC35F3Q8IY50 421 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 MIGA1Q8NAN2 632 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 BEST2Q8NFU1 509 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 HUS1BQ8NHY5 278 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 ARRDC2Q8TBH0 407 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 TRIB2Q92519 343 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 MMABQ96EY8 250 aaPredicted RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 ZNF570Q96NI8 536 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 WDFY2Q96P53 400 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 POLR1BQ9H9Y6 1135 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 EIF2B3Q9NR50 452 aaKnown RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 SEPT11Q9NVA2 429 aaKnown RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 HCFC1R1Q9NWW0 138 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 CISD1Q9NZ45 108 aaKnown RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 DLGAP2Q9P1A6 1054 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 CORO1CQ9ULV4 474 aaPredicted RBP4.93□□□□□ -1.62
VPS36-206ENST00000497149 LYVE1Q9Y5Y7 322 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 CEPT1Q9Y6K0 416 aa4.93□□□□□ -1.62
VPS36-206ENST00000497149 TTC3P53804 2025 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 FSD2A1L4K1 749 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 ANKRD18BA2A2Z9 1011 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 OR6C75A6NL08 312 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 INAFM1C9JVW0 142 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 ASAP2O43150 1006 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 MLYCDO95822 493 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 RARGP13631 454 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 CDH2P19022 906 aaPredicted RBP4.92□□□□□ -1.62
VPS36-206ENST00000497149 NAP1L1P55209 391 aaKnown RBP4.92□□□□□ -1.62
VPS36-206ENST00000497149 CEBPZQ03701 1054 aaKnown RBP4.92□□□□□ -1.62
VPS36-206ENST00000497149 GOLGA8DPQ0D2H9 430 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 CSTF3Q12996 717 aaKnown RBP4.92□□□□□ -1.62
VPS36-206ENST00000497149 CTTNQ14247 550 aaKnown RBP4.92□□□□□ -1.62
VPS36-206ENST00000497149 C2orf68Q2NKX9 166 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 ITPRIPL1Q6GPH6 555 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 PCGF5Q86SE9 256 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 HAPLN4Q86UW8 402 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 ARHGAP12Q8IWW6 846 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 ZBTB2Q8N680 514 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 SCCPDHQ8NBX0 429 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 ERGIC1Q969X5 290 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 TIGD1Q96MW7 591 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 OR6C3Q9NZP0 311 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 CNOT8Q9UFF9 292 aaKnown RBP4.92□□□□□ -1.62
VPS36-206ENST00000497149 INSL5Q9Y5Q6 135 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 PTGDR2Q9Y5Y4 395 aa4.92□□□□□ -1.62
VPS36-206ENST00000497149 A0A1B0GVM2 712 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 CD8B2A6NJW9 211 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 INO80B-WBP1J3KQ70 363 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 J3KR12 359 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 HNRNPCL1O60812 293 aaKnown RBP4.91□□□□□ -1.62
VPS36-206ENST00000497149 VNN2O95498 520 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 KRT10P13645 584 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 GPTP24298 496 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 HOXD3P31249 432 aaPredicted RBP4.91□□□□□ -1.62
VPS36-206ENST00000497149 PIGAP37287 484 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 PGGT1BP53609 377 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 CLNS1AP54105 237 aaKnown RBP4.91□□□□□ -1.62
VPS36-206ENST00000497149 DRG2P55039 364 aaKnown RBP4.91□□□□□ -1.62
VPS36-206ENST00000497149 ABATP80404 500 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 SORDQ00796 357 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 NIPAL4Q0D2K0 466 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 NEDD9Q14511 834 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 USP41Q3LFD5 358 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 CXorf66Q5JRM2 361 aaPredicted RBP4.91□□□□□ -1.62
VPS36-206ENST00000497149 DAB2IPQ5VWQ8 1189 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 FAM205BPQ63HN1 556 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 HIST2H2BCQ6DN03 193 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 HIST2H2BDQ6DRA6 164 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 CLEC4GQ6UXB4 293 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 QSOX2Q6ZRP7 698 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 WDR63Q8IWG1 891 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 AGBL3Q8NEM8 1001 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 ASB5Q8WWX0 329 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 SLC41A2Q96JW4 573 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 TMEM68Q96MH6 324 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 FAM110AQ9BQ89 295 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 C1QTNF5Q9BXJ0 243 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 MKKSQ9NPJ1 570 aaPredicted RBP4.91□□□□□ -1.62
VPS36-206ENST00000497149 HIF1ANQ9NWT6 349 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms