RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 MT-CYBP00156 380 aaPredicted RBP3.84□□□□□ -1.79
CD46-218ENST00000496723 IGHV4-30-4P0DP06 118 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 IRF1P10914 325 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 DAOP14920 347 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 GPTP24298 496 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 COMPP49747 757 aaPredicted RBP3.84□□□□□ -1.79
CD46-218ENST00000496723 EEF1A2Q05639 463 aaKnown RBP3.84□□□□□ -1.79
CD46-218ENST00000496723 NEDD9Q14511 834 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 KIF19Q2TAC6 998 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 FAM69AQ5T7M9 428 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 TXNDC8Q6A555 127 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 HEATR4Q86WZ0 1026 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 SCCPDHQ8NBX0 429 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 ZNF114Q8NC26 417 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 PPM1EQ8WY54 764 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 ST8SIA4Q92187 359 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 FBXL8Q96CD0 374 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 SCMH1Q96GD3 660 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 ADGRG7Q96K78 797 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 MYH16Q9H6N6 1097 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 MAGEE1Q9HCI5 957 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 BPIFA1Q9NP55 256 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 DDX4Q9NQI0 724 aaKnown RBP3.84□□□□□ -1.79
CD46-218ENST00000496723 KCND2Q9NZV8 630 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 MPP6Q9NZW5 540 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 PDP2Q9P2J9 529 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 SLC9A2Q9UBY0 812 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 MALT1Q9UDY8 824 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 ERRFI1Q9UJM3 462 aaPredicted RBP3.84□□□□□ -1.79
CD46-218ENST00000496723 ARHGAP26Q9UNA1 814 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 CRYL1Q9Y2S2 319 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 LSM4Q9Y4Z0 139 aaKnown RBP3.84□□□□□ -1.79
CD46-218ENST00000496723 SNX9Q9Y5X1 595 aa3.84□□□□□ -1.79
CD46-218ENST00000496723 DENND3A2RUS2 1198 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 CPED1A4D0V7 1026 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 SMTNL1A8MU46 457 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 NPIPB11E5RHQ5 1161 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 IFNL4K9M1U5 179 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 NPHP1O15259 732 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 TFP02787 698 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 MMP2P08253 660 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 CD58P19256 250 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 AGAP20933 346 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 ABCD3P28288 659 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 HNRNPH1P31943 449 aaKnown RBP3.83□□□□□ -1.8
CD46-218ENST00000496723 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 COASYQ13057 564 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 SNTA1Q13424 505 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 RNPS1Q15287 305 aaKnown RBP3.83□□□□□ -1.8
CD46-218ENST00000496723 EFNB3Q15768 340 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 TCTN1Q2MV58 587 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 MMEL1Q495T6 779 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 SGO1Q5FBB7 561 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 SPSB3Q6PJ21 355 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 FBXO46Q6PJ61 603 aaPredicted RBP3.83□□□□□ -1.8
CD46-218ENST00000496723 B3GNT6Q6ZMB0 384 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 WFIKKN2Q8TEU8 576 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 CREB3L4Q8TEY5 395 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 KLHL29Q96CT2 875 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 IGSF21Q96ID5 467 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 DUX5Q96PT3 197 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 OR1F2PQ96R84 312 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 H2AFJQ9BTM1 129 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 GLIS2Q9BZE0 524 aaPredicted RBP3.83□□□□□ -1.8
CD46-218ENST00000496723 GAREM1Q9H706 876 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 NOX4Q9NPH5 578 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 PLSCR4Q9NRQ2 329 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 SLCO3A1Q9UIG8 710 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 ICAM5Q9UMF0 924 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 CYP46A1Q9Y6A2 500 aa3.83□□□□□ -1.8
CD46-218ENST00000496723 ARID4BQ4LE39 1312 aaPredicted RBP3.83□□□□□ -1.8
CD46-218ENST00000496723 LOC102724159A0A0B4J2E5 919 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 GAGE7O76087 117 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 AFPP02771 609 aaKnown RBP3.82□□□□□ -1.8
CD46-218ENST00000496723 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 STX2P32856 288 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 SHMT1P34896 483 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 NEXNQ0ZGT2 675 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 FOXD4Q12950 439 aaPredicted RBP3.82□□□□□ -1.8
CD46-218ENST00000496723 DLG1Q12959 904 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 GAGE1Q13065 139 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 GAGE4Q13068 117 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 PWP2Q15269 919 aaKnown RBP3.82□□□□□ -1.8
CD46-218ENST00000496723 CALCRLQ16602 461 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 PRICKLE4Q2TBC4 344 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 AMZ1Q400G9 498 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 SETMARQ53H47 684 aaPredicted RBP3.82□□□□□ -1.8
CD46-218ENST00000496723 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 LCTLQ6UWM7 567 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 SLC35F3Q8IY50 421 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 AGBL3Q8NEM8 1001 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 BEST2Q8NFU1 509 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 SLITRK1Q96PX8 696 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 CSF3RQ99062 836 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 EIF2AK1Q9BQI3 630 aaKnown RBP3.82□□□□□ -1.8
CD46-218ENST00000496723 PAIP1Q9H074 479 aaKnown RBP3.82□□□□□ -1.8
CD46-218ENST00000496723 SLC25A18Q9H1K4 315 aa3.82□□□□□ -1.8
CD46-218ENST00000496723 RETREG1Q9H6L5 497 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms