RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 NEMP1O14524 444 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 AREL1O15033 823 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 TSPAN6O43657 245 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 CTPS1P17812 591 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 CD6P30203 668 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 FNTBP49356 437 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 ADPRHP54922 357 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 DMWDQ09019 674 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 MAP7D1Q3KQU3 841 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 LRRC73Q5JTD7 316 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 ANKRD22Q5VYY1 191 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 DENND5AQ6IQ26 1287 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 LRRN4CLQ8ND94 238 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 LYSMD1Q96S90 227 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 MAGEE1Q9HCI5 957 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 CD93Q9NPY3 652 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 ANAPC5Q9UJX4 755 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 SHOC2Q9UQ13 582 aa21.85■■□□□ 1.09
C9orf3-222ENST00000496567 LRRC72A6NJI9 287 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 GALR2O43603 387 aaPredicted RBP21.84■■□□□ 1.09
C9orf3-222ENST00000496567 PRKCGP05129 697 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 HNF1BP35680 557 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 MMP12P39900 470 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 TAS2R38P59533 333 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 GUCY2DQ02846 1103 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 ANGPT1Q15389 498 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 HIBCHQ6NVY1 386 aaPredicted RBP21.84■■□□□ 1.09
C9orf3-222ENST00000496567 LRRC8BQ6P9F7 803 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 OR52K1Q8NGK4 314 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 RLN3Q8WXF3 142 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 PREBQ9HCU5 417 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 CASS4Q9NQ75 786 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 WSB2Q9NYS7 404 aaPredicted RBP21.84■■□□□ 1.09
C9orf3-222ENST00000496567 HACD3Q9P035 362 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 B4GALT6Q9UBX8 382 aa21.84■■□□□ 1.09
C9orf3-222ENST00000496567 IGHV1OR15-9A0A0B4J2B8 117 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 TMEM63AO94886 807 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 ALPIP09923 528 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 VIPR1P32241 457 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 ACSL1P33121 698 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 ITGA8P53708 1063 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 TMEM52BQ4KMG9 183 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 TEX35Q5T0J7 233 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 NEK5Q6P3R8 708 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 DPPA4Q7L190 304 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 OR2T34Q8NGX1 318 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 SEC14L1Q92503 715 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 TOE1Q96GM8 510 aaKnown RBP21.83■■□□□ 1.09
C9orf3-222ENST00000496567 LRFN3Q9BTN0 628 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 FRMD8Q9BZ67 464 aaPredicted RBP21.83■■□□□ 1.09
C9orf3-222ENST00000496567 TRABDQ9H4I3 376 aa21.83■■□□□ 1.09
C9orf3-222ENST00000496567 XAB2Q9HCS7 855 aaKnown RBP21.83■■□□□ 1.09
C9orf3-222ENST00000496567 DMGDHQ9UI17 866 aaKnown RBP21.83■■□□□ 1.09
C9orf3-222ENST00000496567 TBC1D3DA0A087WVF3 549 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3IA0A087WXS9 549 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3EA0A087X179 549 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3KA0A087X1G2 549 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3FA6NER0 549 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3LB9A6J9 549 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 DLL1O00548 723 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 PCDH8O95206 1070 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 SEMA4FO95754 770 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3HP0C7X1 549 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 MLNP12872 115 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 GRIA1P42261 906 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 CAV1Q03135 178 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 ARHGEF7Q14155 803 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3GQ6DHY5 549 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3CQ6IPX1 549 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 SLC36A4Q6YBV0 504 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 TBC1D3Q8IZP1 549 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-222ENST00000496567 EPB41L5Q9HCM4 733 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 FAM114A2Q9NRY5 505 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 ITM2BQ9Y287 266 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 NPIPB15A6NHN6 443 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-222ENST00000496567 H0Y858 1186 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 SPINT1O43278 529 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 NDUFS2O75306 463 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 ZNF30P17039 623 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 BLOC1S5Q8TDH9 187 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 CXorf40AQ8TE69 158 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 NELL1Q92832 810 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 BFARQ9NZS9 450 aa21.82■■□□□ 1.08
C9orf3-222ENST00000496567 FAM47DPA6NHR8 397 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 BHMG1C9JSJ3 638 aaPredicted RBP21.81■■□□□ 1.08
C9orf3-222ENST00000496567 GOLGA8MH3BSY2 632 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 RHOXF2BP0C7M4 288 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 PIRTP0C851 137 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 SP9P0CG40 484 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 NPY2RP49146 381 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 KIAA1161Q6NSJ0 714 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 CRTC1Q6UUV9 634 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 C11orf74Q86VG3 221 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 FAM160A2Q8N612 972 aaPredicted RBP21.81■■□□□ 1.08
C9orf3-222ENST00000496567 BRSK1Q8TDC3 778 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 SERPINB12Q96P63 405 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 SMIM14Q96QK8 99 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 HINFPQ9BQA5 517 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 RHOXF2Q9BQY4 288 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 PIH1D1Q9NWS0 290 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms