RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
FN1-226ENST00000496542 POLR1BQ9H9Y6 1135 aa13.03□□□□□ -0.32
FN1-226ENST00000496542 MRPL47Q9HD33 250 aaKnown RBP13.03□□□□□ -0.32
FN1-226ENST00000496542 GULP1Q9UBP9 304 aa13.03□□□□□ -0.32
FN1-226ENST00000496542 SEPT3Q9UH03 358 aa13.03□□□□□ -0.32
FN1-226ENST00000496542 PADI4Q9UM07 663 aa13.03□□□□□ -0.32
FN1-226ENST00000496542 TTC24A2A3L6 582 aaPredicted RBP13.02□□□□□ -0.33
FN1-226ENST00000496542 CASC3O15234 703 aaKnown RBP13.02□□□□□ -0.33
FN1-226ENST00000496542 ALPIP09923 528 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 TCF4P15884 667 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 IL1R2P27930 398 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 PCK1P35558 622 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 ARL4AP40617 200 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 LSSP48449 732 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 HCAR3P49019 387 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 RENBPP51606 427 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 SRP54P61011 504 aaKnown RBP13.02□□□□□ -0.33
FN1-226ENST00000496542 AP1S1P61966 158 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 RALGDSQ12967 914 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 MTM1Q13496 603 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 ZNF235Q14590 738 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 LBRQ14739 615 aaKnown RBP13.02□□□□□ -0.33
FN1-226ENST00000496542 NR1I3Q14994 352 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 ACAP1Q15027 740 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 SPACA3Q8IXA5 215 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 ARL10Q8N8L6 244 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 PLA2G15Q8NCC3 412 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 ATL2Q8NHH9 583 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 TPCN2Q8NHX9 752 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 SCG3Q8WXD2 468 aaKnown RBP13.02□□□□□ -0.33
FN1-226ENST00000496542 ECHDC3Q96DC8 303 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 PDXPQ96GD0 296 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 WDR92Q96MX6 357 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 FCRL3Q96P31 734 aaPredicted RBP13.02□□□□□ -0.33
FN1-226ENST00000496542 CCDC3Q9BQI4 270 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 PRORYQ9H606 182 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.02□□□□□ -0.33
FN1-226ENST00000496542 ETNK2Q9NVF9 386 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 GPR34Q9UPC5 381 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 SATB2Q9UPW6 733 aa13.02□□□□□ -0.33
FN1-226ENST00000496542 A8MX80 341 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 CACNB4O00305 520 aaPredicted RBP13.01□□□□□ -0.33
FN1-226ENST00000496542 RECQL5O94762 991 aaPredicted RBP13.01□□□□□ -0.33
FN1-226ENST00000496542 AMPD1P23109 780 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 POLR2LP62875 67 aaKnown RBP13.01□□□□□ -0.33
FN1-226ENST00000496542 TPM4P67936 248 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 TLE3Q04726 772 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 NSUN2Q08J23 767 aaKnown RBP eCLIP13.01□□□□□ -0.33
FN1-226ENST00000496542 SLC10A7Q0GE19 358 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 AGERQ15109 404 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 DPYSL2Q16555 572 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 KCTD16Q68DU8 428 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 FOXR1Q6PIV2 292 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 TMCO3Q6UWJ1 677 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 LIPIQ6XZB0 460 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 DPPA4Q7L190 304 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 GKN2Q86XP6 184 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 LSMEM2Q8N112 164 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 LZTR1Q8N653 840 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 ZNF248Q8NDW4 579 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 PDCD6IPQ8WUM4 868 aaKnown RBP13.01□□□□□ -0.33
FN1-226ENST00000496542 CCDC74AQ96AQ1 378 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 NSMCE3Q96MG7 304 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 ZNF599Q96NL3 588 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 CSPG4P5Q96PW8 444 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 PSKH2Q96QS6 385 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 UBL7Q96S82 380 aaPredicted RBP13.01□□□□□ -0.33
FN1-226ENST00000496542 FUCA2Q9BTY2 467 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 ISCUQ9H1K1 167 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 CBX8Q9HC52 389 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 ENTPD2Q9Y5L3 495 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 CFAP46Q8IYW2 2715 aa13.01□□□□□ -0.33
FN1-226ENST00000496542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13□□□□□ -0.33
FN1-226ENST00000496542 A0A1W2PNU3 283 aaPredicted RBP13□□□□□ -0.33
FN1-226ENST00000496542 SYCE3A1L190 88 aa13□□□□□ -0.33
FN1-226ENST00000496542 CFAP69A5D8W1 941 aa13□□□□□ -0.33
FN1-226ENST00000496542 TRAFD1O14545 582 aaPredicted RBP13□□□□□ -0.33
FN1-226ENST00000496542 TCEA3O75764 348 aa13□□□□□ -0.33
FN1-226ENST00000496542 DXOO77932 396 aaKnown RBP13□□□□□ -0.33
FN1-226ENST00000496542 TNFP01375 233 aa13□□□□□ -0.33
FN1-226ENST00000496542 RARAP10276 462 aa13□□□□□ -0.33
FN1-226ENST00000496542 RBMS1P29558 406 aaKnown RBP13□□□□□ -0.33
FN1-226ENST00000496542 KIAA1024LP59773 190 aa13□□□□□ -0.33
FN1-226ENST00000496542 FANCCQ00597 558 aa13□□□□□ -0.33
FN1-226ENST00000496542 SPIDRQ14159 915 aa13□□□□□ -0.33
FN1-226ENST00000496542 ACOX1Q15067 660 aa13□□□□□ -0.33
FN1-226ENST00000496542 BOLA3Q53S33 107 aa13□□□□□ -0.33
FN1-226ENST00000496542 FIGNQ5HY92 759 aa13□□□□□ -0.33
FN1-226ENST00000496542 HGSNATQ68CP4 663 aa13□□□□□ -0.33
FN1-226ENST00000496542 TXNRD3NBQ6F5E7 133 aa13□□□□□ -0.33
FN1-226ENST00000496542 LVRNQ6Q4G3 990 aa13□□□□□ -0.33
FN1-226ENST00000496542 POLNQ7Z5Q5 900 aa13□□□□□ -0.33
FN1-226ENST00000496542 LUZP1Q86V48 1076 aa13□□□□□ -0.33
FN1-226ENST00000496542 ATPAF2Q8N5M1 289 aa13□□□□□ -0.33
FN1-226ENST00000496542 WDR48Q8TAF3 677 aa13□□□□□ -0.33
FN1-226ENST00000496542 OR1E3Q8WZA6 343 aa13□□□□□ -0.33
FN1-226ENST00000496542 FUBP1Q96AE4 644 aaKnown RBP13□□□□□ -0.33
FN1-226ENST00000496542 HIC2Q96JB3 615 aa13□□□□□ -0.33
FN1-226ENST00000496542 BTBD6Q96KE9 485 aa13□□□□□ -0.33
FN1-226ENST00000496542 THAP2Q9H0W7 228 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms