RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 RENBPP51606 427 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 HK3P52790 923 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 ADKP55263 362 aaKnown RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 PPARDQ03181 441 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 MTM1Q13496 603 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 ZNF235Q14590 738 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 INPP5AQ14642 412 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 NFATC4Q14934 902 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 ALG11Q2TAA5 492 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 PERM1Q5SV97 790 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 C6orf132Q5T0Z8 1188 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 ALKBH5Q6P6C2 394 aaKnown RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 LIPIQ6XZB0 460 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 EFL1Q7Z2Z2 1120 aaKnown RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 PDZD3Q86UT5 571 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 PELI3Q8N2H9 469 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 ATPAF2Q8N5M1 289 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 FAM71BQ8TC56 605 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 MAPK15Q8TD08 544 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 SPOCK2Q92563 424 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 TSACCQ96A04 125 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 DCBLD2Q96PD2 775 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 IL12RB2Q99665 862 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 MGME1Q9BQP7 344 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 APOOQ9BUR5 198 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 SLC13A1Q9BZW2 595 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 XPO4Q9C0E2 1151 aaKnown RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 IP6K2Q9UHH9 426 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 PTPRQQ9UMZ3 2332 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 YY2O15391 372 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 MFSD11O43934 449 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 CSO75390 466 aaKnown RBP14.34□□□□□ -0.11
VTI1A-209ENST00000496445 RECQL5O94762 991 aaPredicted RBP14.34□□□□□ -0.11
VTI1A-209ENST00000496445 ELFN1P0C7U0 828 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 HNRNPH3P31942 346 aaKnown RBP14.34□□□□□ -0.11
VTI1A-209ENST00000496445 ARSEP51690 589 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 CDH6P55285 790 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 NR0B2Q15466 257 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 TCEA2Q15560 299 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 KIF26BQ2KJY2 2108 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 CCDC122Q5T0U0 273 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 FAXCQ5TGI0 409 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 CRTC1Q6UUV9 634 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 HID1Q8IV36 788 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 SNIP1Q8TAD8 396 aaKnown RBP14.34□□□□□ -0.11
VTI1A-209ENST00000496445 ZNF564Q8TBZ8 553 aaPredicted RBP14.34□□□□□ -0.11
VTI1A-209ENST00000496445 PDXPQ96GD0 296 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 NUDCD1Q96RS6 583 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 PACSIN1Q9BY11 444 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 EVA1BQ9NVM1 165 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 NCKIPSDQ9NZQ3 722 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 B4GALT6Q9UBX8 382 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 MGAQ8IWI9 3026 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 ATMQ13315 3056 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 ATRXP46100 2492 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 KALRNO60229 2985 aa14.34□□□□□ -0.11
VTI1A-209ENST00000496445 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-209ENST00000496445 CPED1A4D0V7 1026 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 TMEM110-MUSTN1A8MSY1 372 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 A8MX80 341 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 SOCS5O75159 536 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 ANXA6P08133 673 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 ITPKBP27987 946 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 SERPINB6P35237 376 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 HSPA9P38646 679 aaKnown RBP14.33□□□□□ -0.12
VTI1A-209ENST00000496445 EIF2S3P41091 472 aaKnown RBP14.33□□□□□ -0.12
VTI1A-209ENST00000496445 KIAA1024LP59773 190 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 SRP54P61011 504 aaKnown RBP14.33□□□□□ -0.12
VTI1A-209ENST00000496445 MAXP61244 160 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 TRAF2Q12933 501 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 DPYSL3Q14195 570 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 KRT81Q14533 505 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 CNGA3Q16281 694 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 TBC1D25Q3MII6 688 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 ATP13A4Q4VNC1 1196 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 ENPP7Q6UWV6 458 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 FSTL5Q8N475 847 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-209ENST00000496445 KYQ8NBH2 561 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 PCDH19Q8TAB3 1148 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 FUBP1Q96AE4 644 aaKnown RBP14.33□□□□□ -0.12
VTI1A-209ENST00000496445 WDR92Q96MX6 357 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 DEPDC7Q96QD5 511 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 NOD2Q9HC29 1040 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 RCOR3Q9P2K3 495 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-209ENST00000496445 KLQ9UEF7 1012 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 PCDHGC4Q9Y5F7 938 aa14.33□□□□□ -0.12
VTI1A-209ENST00000496445 A0A1W2PNU3 283 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-209ENST00000496445 TMEM202A6NGA9 273 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 MYO1FO00160 1098 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 RASGRP1O95267 797 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 CPP00450 1065 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 LHCGRP22888 699 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 HTR1BP28222 390 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 GJC1P36383 396 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 MMP13P45452 471 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 ABCG1P45844 678 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 BLKP51451 505 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms