RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 KIR2DL3P43628 341 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 KCNJ5P48544 419 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 CCR5P51681 352 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 NR1H2P55055 460 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 NCKAP1LP55160 1127 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 UCP3P55916 312 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 OSTNP61366 133 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 YWHAHQ04917 246 aaPredicted RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 DUSP8Q13202 625 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 DMP1Q13316 513 aaPredicted RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 HABP2Q14520 560 aaPredicted RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 PON2Q15165 354 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ZBTB6Q15916 424 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 CTXN3Q4LDR2 81 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 TMEM119Q4V9L6 283 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 TMTC4Q5T4D3 741 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 SLC39A4Q6P5W5 647 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 FBXO38Q6PIJ6 1188 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 SEM1Q6ZVN7 128 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 C1orf186Q6ZWK4 172 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 TMEM150AQ86TG1 271 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 CCDC83Q8IWF9 413 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 CCDC89Q8N998 374 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 PCYOX1LQ8NBM8 494 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 LEMD2Q8NC56 503 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ERMNQ8TAM6 284 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ADAMTS14Q8WXS8 1223 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 GFM2Q969S9 779 aaKnown RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 ERP27Q96DN0 273 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ZFYVE19Q96K21 471 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ZBTB45Q96K62 511 aaPredicted RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 CLIC6Q96NY7 704 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 PGLYRP2Q96PD5 576 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 FIZ1Q96SL8 496 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 NDC1Q9BTX1 674 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 TRMT61BQ9BVS5 477 aaKnown RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 TRIM4Q9C037 500 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 SLC6A17Q9H1V8 727 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 BRD9Q9H8M2 597 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 GPR35Q9HC97 309 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ZFP14Q9HCL3 533 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ASAH2Q9NR71 780 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 DDX19AQ9NUU7 478 aaKnown RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 TBC1D23Q9NUY8 699 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ZNF212Q9UDV6 495 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 MID2Q9UJV3 735 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 CROTQ9UKG9 612 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 TBC1D30Q9Y2I9 924 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 PCDHA5Q9Y5H7 936 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 MUC22E2RYF6 1773 aaPredicted RBP4.5□□□□□ -1.69
VPS52-222ENST00000495981 FBN3Q75N90 2809 aa4.5□□□□□ -1.69
VPS52-222ENST00000495981 ITIH6Q6UXX5 1313 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 PLXNB3Q9ULL4 1909 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 TCRBV7S2A1N4TA0A589 114 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 FAM149AA5PLN7 773 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 OTOL1A6NHN0 477 aaPredicted RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 E9PMD0 336 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 H7C4K7 107 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 CHADO15335 359 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 TOX4O94842 621 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 TBX18O95935 607 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 HSP90AA1P07900 732 aaKnown RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 GYPEP15421 78 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 PTPN2P17706 415 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 ENGP17813 658 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 EGR1P18146 543 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 BTF3P20290 206 aaKnown RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 U2AF2P26368 475 aaKnown RBP eCLIP4.49□□□□□ -1.692e-14■■□□□ 11.8
VPS52-222ENST00000495981 IL1R2P27930 398 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 RPL9P32969 192 aaKnown RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 PRPHP41219 470 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 CDR1P51861 262 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 ZNF131P52739 623 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 COPAP53621 1224 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 PRKAA2P54646 552 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 SLC12A3P55017 1021 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 ARPP19P56211 112 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 ATP2C1P98194 919 aaPredicted RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 DUSP2Q05923 314 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 SPAG1Q07617 926 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 RAB32Q13637 225 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 TRIM29Q14134 588 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 EFR3AQ14156 821 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 PCOLCEQ15113 449 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 CCDC142Q17RM4 750 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 CRB2Q5IJ48 1285 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 RAP1GAP2Q684P5 730 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 LMBRD2Q68DH5 695 aaPredicted RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 FCRL6Q6DN72 434 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 FAAH2Q6GMR7 532 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 RINT1Q6NUQ1 792 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 SPOCD1Q6ZMY3 1216 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 IRF2BP1Q8IU81 584 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 MFSD6LQ8IWD5 586 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 EFCAB13Q8IY85 973 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 SDR16C5Q8N3Y7 309 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 SLC15A4Q8N697 577 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 PDILTQ8N807 584 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 C1orf131Q8NDD1 294 aaKnown RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 STKLD1Q8NE28 680 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms