RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 TXLNGQ9NUQ3 528 aa5.35□□□□□ -1.55
NCKAP1-208ENST00000495619 CTNNAL1Q9UBT7 734 aa5.35□□□□□ -1.55
NCKAP1-208ENST00000495619 SLC25A10Q9UBX3 287 aaPredicted RBP5.35□□□□□ -1.55
NCKAP1-208ENST00000495619 LRRFIP2Q9Y608 721 aaKnown RBP5.35□□□□□ -1.55
NCKAP1-208ENST00000495619 BCAT2O15382 392 aaPredicted RBP5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 NCAM2O15394 837 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 POLBP06746 335 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 HNRNPA1P09651 372 aaKnown RBP eCLIP5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 DDX5P17844 614 aaKnown RBP5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 HNRNPH1P31943 449 aaKnown RBP5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 GRSF1Q12849 480 aaKnown RBP eCLIP5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 TNFAIP1Q13829 316 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 BAK1Q16611 211 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 TMEM95Q3KNT9 176 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 ATP13A5Q4VNC0 1218 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 CREB3L4Q8TEY5 395 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 ERGIC1Q969X5 290 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 ZNF556Q9HAH1 456 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 MAGEE1Q9HCI5 957 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 C20orf141Q9NUB4 165 aa5.34□□□□□ -1.55
NCKAP1-208ENST00000495619 UTYO14607 1347 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 CPED1A4D0V7 1026 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 TFP02787 698 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 SRCP12931 536 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 SSTR2P30874 369 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 ZNF672Q499Z4 452 aaPredicted RBP5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 FAM69BQ5VUD6 431 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 LRRC8EQ6NSJ5 796 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 UNQ6126/PRO20091Q6UXV3 157 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 DLK2Q6UY11 383 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 LINGO2Q7L985 606 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 SCMH1Q96GD3 660 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 IL17FQ96PD4 163 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 EPYCQ99645 322 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 C17orf75Q9HAS0 396 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 KCND2Q9NZV8 630 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 RCOR1Q9UKL0 485 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 A4GNTQ9UNA3 340 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 VDAC3Q9Y277 283 aa5.33□□□□□ -1.56
NCKAP1-208ENST00000495619 IFITM10A6NMD0 228 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 SRRM3A6NNA2 597 aaPredicted RBP5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 AKR1B15C9JRZ8 316 aaPredicted RBP5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 BUB3O43684 328 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 KLK8O60259 260 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 AGAP20933 346 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 RRM1P23921 792 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 POU5F1BQ06416 359 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 GALNT2Q10471 571 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 CCNI2Q6ZMN8 369 aaPredicted RBP5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 RFLNBQ8N5W9 214 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 SPATA3Q8NHX4 192 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 KLHL29Q96CT2 875 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 SAAL1Q96ER3 474 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 C3orf30Q96M34 536 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 TTYH1Q9H313 450 aaPredicted RBP5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 GAREM1Q9H706 876 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 SLC9A2Q9UBY0 812 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 SIX4Q9UIU6 781 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 PCDHAC2Q9Y5I4 1007 aa5.32□□□□□ -1.56
NCKAP1-208ENST00000495619 LRRC53A6NM62 1247 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 NPHP1O15259 732 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 ZNF432O94892 652 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 PMS2P2O95744 297 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 F7P08709 466 aaPredicted RBP5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 HOXB5P09067 269 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 ITGAXP20702 1163 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 MT3P25713 68 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 GGT5P36269 586 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 IL15P40933 162 aaPredicted RBP5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 NEXNQ0ZGT2 675 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 RNPS1Q15287 305 aaKnown RBP5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 OASLQ15646 514 aaKnown RBP5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 KRT24Q2M2I5 525 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 ZNF718Q3SXZ3 478 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 TXNDC8Q6A555 127 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 GSTA5Q7RTV2 222 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 CUZD1Q86UP6 607 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 SFR1Q86XK3 245 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 PPM1EQ8WY54 764 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 DNASE2BQ8WZ79 361 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 ZBTB10Q96DT7 871 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 RNF125Q96EQ8 232 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 KLHL15Q96M94 604 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 MPHOSPH8Q99549 860 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 SH3GL2Q99962 352 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 WASH6PQ9NQA3 447 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 ZNF224Q9NZL3 707 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 KCNG2Q9UJ96 466 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 FBXO9Q9UK97 447 aaPredicted RBP5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 ERVK-11Q9UQG0 969 aa5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 LSM4Q9Y4Z0 139 aaKnown RBP5.31□□□□□ -1.56
NCKAP1-208ENST00000495619 TMEM202A6NGA9 273 aa5.3□□□□□ -1.56
NCKAP1-208ENST00000495619 HNRNPCL2B2RXH8 293 aa5.3□□□□□ -1.56
NCKAP1-208ENST00000495619 USP17L23D6RBM5 183 aa5.3□□□□□ -1.56
NCKAP1-208ENST00000495619 KRT86O43790 486 aa5.3□□□□□ -1.56
NCKAP1-208ENST00000495619 CAMTA2O94983 1202 aa5.3□□□□□ -1.56
NCKAP1-208ENST00000495619 CLDN14O95500 239 aa5.3□□□□□ -1.56
NCKAP1-208ENST00000495619 CTCFP49711 727 aaPredicted RBP5.3□□□□□ -1.56
NCKAP1-208ENST00000495619 GNAQP50148 359 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms