RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 LATO43561 262 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 EPN2O95208 641 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 GAS8O95995 478 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 PRLP01236 227 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 TRBC1P01850 177 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 PRKCGP05129 697 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 IGHV4-34P06331 123 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 RETP07949 1114 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 HLA-DPA1P20036 260 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 VIPR1P32241 457 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 PPP2CBP62714 309 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 PPP2CAP67775 309 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 KDELC2Q7Z4H8 507 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 SYT12Q8IV01 421 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 PIGKQ92643 395 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 TRIB3Q96RU7 358 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 NCDNQ9UBB6 729 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 B4GALT6Q9UBX8 382 aa17.18■□□□□ 0.34
HDAC6-235ENST00000495515 PLXND1Q9Y4D7 1925 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 LOC285095A0A1B0GVY8 99 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 A0A1W2PPC4 97 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 CAPN8A6NHC0 703 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 C10orf142B7Z368 130 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 E7EVH7 732 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 SPINT1O43278 529 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 MMP20O60882 483 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 TM7SF2O76062 418 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 ELFN1P0C7U0 828 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 ZNF30P17039 623 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 CTPS1P17812 591 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 ITIH2P19823 946 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 ITPKAP23677 461 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 MAT2AP31153 395 aaKnown RBP17.17■□□□□ 0.34
HDAC6-235ENST00000495515 LMAN1P49257 510 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 CKAP4Q07065 602 aaKnown RBP17.17■□□□□ 0.34
HDAC6-235ENST00000495515 TUBB2AQ13885 445 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 GALNT3Q14435 633 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 QPCTQ16769 361 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 ZNF284Q2VY69 593 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 TMEM259Q4ZIN3 620 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 SEL1L3Q68CR1 1132 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 KIF18AQ8NI77 898 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 ASB12Q8WXK4 309 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 MRGPRX2Q96LB1 330 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 WRAP53Q9BUR4 548 aaKnown RBP17.17■□□□□ 0.34
HDAC6-235ENST00000495515 TUBB2BQ9BVA1 445 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 SLC17A9Q9BYT1 436 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 MIR1-1HGQ9H1L0 117 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 LRRC40Q9H9A6 602 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 KCTD5Q9NXV2 234 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 EIF2B4Q9UI10 523 aaKnown RBP17.17■□□□□ 0.34
HDAC6-235ENST00000495515 GGT7Q9UJ14 662 aa17.17■□□□□ 0.34
HDAC6-235ENST00000495515 IGLON5A6NGN9 336 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 PRR5-ARHGAP8B1AHC4 643 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 PRAMEF26H0Y7S4 382 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 PSMD11O00231 422 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 LZTS3O60299 673 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-235ENST00000495515 URI1O94763 535 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-235ENST00000495515 METTL18O95568 372 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 ECEL1O95672 775 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 FGF1P05230 155 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 AKT2P31751 481 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 RPL22P35268 128 aaKnown RBP17.16■□□□□ 0.34
HDAC6-235ENST00000495515 HNF1BP35680 557 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 LIG3P49916 1009 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 NAPEPLDQ6IQ20 393 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 TTC27Q6P3X3 843 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 CEP76Q8TAP6 659 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 CCHCR1Q8TD31 782 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 LYSMD1Q96S90 227 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 FICDQ9BVA6 458 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 C1QTNF2Q9BXJ5 285 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 RAB6BQ9NRW1 208 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 CDC23Q9UJX2 597 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 PILRBQ9UKJ0 227 aa17.16■□□□□ 0.34
HDAC6-235ENST00000495515 ZFR2Q9UPR6 939 aaKnown RBP17.16■□□□□ 0.34
HDAC6-235ENST00000495515 FANCMQ8IYD8 2048 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 A0A1B0GTW7 788 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 NPIPB15A6NHN6 443 aaPredicted RBP17.15■□□□□ 0.34
HDAC6-235ENST00000495515 SLC31A1O15431 190 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 GFRA3O60609 400 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 HEXIM1O94992 359 aaKnown RBP17.15■□□□□ 0.34
HDAC6-235ENST00000495515 KRT14P02533 472 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 ALPIP09923 528 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 C6P13671 934 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 ETS1P14921 441 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 HNRNPA2B1P22626 353 aaKnown RBP17.15■□□□□ 0.34
HDAC6-235ENST00000495515 MAOBP27338 520 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 RACK1P63244 317 aaKnown RBP17.15■□□□□ 0.34
HDAC6-235ENST00000495515 RALGDSQ12967 914 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 PPP1R7Q15435 360 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 SLC1A5Q15758 541 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 LIPIQ6XZB0 460 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 LINC00523Q86TU6 105 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 KLHDC8BQ8IXV7 354 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 RAVER1Q8IY67 606 aaKnown RBP17.15■□□□□ 0.34
HDAC6-235ENST00000495515 DENND6BQ8NEG7 585 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 RUBCNQ92622 972 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 SKA1Q96BD8 255 aa17.15■□□□□ 0.34
HDAC6-235ENST00000495515 SERAC1Q96JX3 654 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms