RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 HSP90AA5PQ58FG0 334 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 CXorf57Q6NSI4 855 aaKnown RBP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 MRNIPQ6NTE8 343 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 CES3Q6UWW8 571 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 NUDT18Q6ZVK8 323 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 KDELC2Q7Z4H8 507 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 RALGPS2Q86X27 583 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 CNTN4Q8IWV2 1026 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 CPA6Q8N4T0 437 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 PAF1Q8N7H5 531 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 TTC16Q8NEE8 873 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SH3RF2Q8TEC5 729 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 TSPAN17Q96FV3 270 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 VPS39Q96JC1 886 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SERAC1Q96JX3 654 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 FCRL3Q96P31 734 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 KXD1Q9BQD3 176 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 IER2Q9BTL4 223 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SLC2A11Q9BYW1 496 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SLC13A1Q9BZW2 595 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 RHOJQ9H4E5 214 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 MANSC1Q9H8J5 431 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 PLAC1Q9HBJ0 212 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SMYD2Q9NRG4 433 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SLC25A13Q9UJS0 675 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 CORO1CQ9ULV4 474 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 RPL26L1Q9UNX3 145 aaKnown RBP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 VPS9D1Q9Y2B5 631 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 PLLPQ9Y342 182 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 GFRA2O00451 464 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 GREM1O60565 184 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 RFPL1O75677 317 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 TMCC1O94876 653 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 ADH1CP00326 375 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 ASGR2P07307 311 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 CRABP2P29373 138 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 PPARGP37231 505 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-214ENST00000495485 NNMTP40261 264 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 VIPR2P41587 438 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 CD151P48509 253 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 EPHB1P54762 984 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 SNRPD1P62314 119 aaKnown RBP10.31□□□□□ -0.76
HDAC3-214ENST00000495485 ASPHQ12797 758 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 OLIG2Q13516 323 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 BMPR2Q13873 1038 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 ITIH4Q14624 930 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 CYTH1Q15438 398 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 TAF1AQ15573 450 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-214ENST00000495485 CNGA3Q16281 694 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 SIRPB2Q5JXA9 342 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 NEPROQ6NW34 567 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 TRIM67Q6ZTA4 783 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 SRLQ86TD4 932 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 BBS7Q8IWZ6 715 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 LRRC34Q8IZ02 419 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 PGBD5Q8N414 524 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 OTUD6BQ8N6M0 293 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 CCDC63Q8NA47 563 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 PPP1R14CQ8TAE6 165 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 MYEOVQ96EZ4 313 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 SEC16BQ96JE7 1060 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 C19orf43Q9BQ61 176 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 TREX1Q9NSU2 369 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 ABCB8Q9NUT2 735 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 PCMTD2Q9NV79 361 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 DUS2Q9NX74 493 aaKnown RBP10.31□□□□□ -0.76
HDAC3-214ENST00000495485 KLHL14Q9P2G3 628 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 MUTYHQ9UIF7 546 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 FBXL21Q9UKT6 434 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 STARD13Q9Y3M8 1113 aa10.31□□□□□ -0.76
HDAC3-214ENST00000495485 ATXN2Q99700 1313 aaKnown RBP10.31□□□□□ -0.76
HDAC3-214ENST00000495485 MROH6A6NGR9 719 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 GOLGA8CPA6NN73 597 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ARNTLO00327 626 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 KLF11O14901 512 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 H2AFYO75367 372 aaKnown RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 RPP40O75818 363 aaKnown RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 PIAS1O75925 651 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 IGSF6O95976 241 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 CR2P20023 1033 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 CSKP41240 450 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 SGSHP51688 502 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 CLCN5P51795 746 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 PRKAA2P54646 552 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 WDR4P57081 412 aaKnown RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 STARD6P59095 220 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 POU4F1Q01851 419 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 BCL2L1Q07817 233 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 RUNX3Q13761 415 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 MPP2Q14168 576 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 MLF2Q15773 248 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 TSNAXIP1Q2TAA8 658 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 FAM182AQ5T1J6 154 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ARMC12Q5T9G4 340 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 FSTL4Q6MZW2 842 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ESRP1Q6NXG1 681 aaKnown RBP10.3□□□□□ -0.76
HDAC3-214ENST00000495485 ZNF852Q6ZMS4 543 aa10.3□□□□□ -0.76
HDAC3-214ENST00000495485 TPGS1Q6ZTW0 290 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms