RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SLC25A23Q9BV35 468 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CALN1Q9BXU9 219 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 SEMA6AQ9H2E6 1030 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 EPS8L2Q9H6S3 715 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 KLHL21Q9UJP4 597 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ERVW-1Q9UQF0 538 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 LTBP1Q14766 1721 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 DOCK1Q14185 1865 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 LEUTXA8MZ59 168 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 H7C0C1 242 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 RAD51BO15315 384 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TBC1D4O60343 1298 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ZNF780AO75290 641 aaPredicted RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CABYRO75952 493 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ITGB3P05106 788 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TCF4P15884 667 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CD9P21926 228 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CHMP24386 653 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 RPL10P27635 214 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ERP29P30040 261 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 BMP8BP34820 402 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TUFMP49411 452 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 GPLD1P80108 840 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CLCQ05315 142 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CYP24A1Q07973 514 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 NEDD8Q15843 81 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 SMU1Q2TAY7 513 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 HABP4Q5JVS0 413 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 UBE2UQ5VVX9 321 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 LIPMQ5VYY2 423 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 LAIR2Q6ISS4 152 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 SCARA5Q6ZMJ2 495 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 GDPD3Q7L5L3 318 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CATSPER4Q7RTX7 472 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ZNF438Q7Z4V0 828 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 BMP8AQ7Z5Y6 402 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 GALNT7Q86SF2 657 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 NOXA1Q86UR1 476 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 FAM160B2Q86V87 743 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CHDHQ8NE62 594 aaPredicted RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 SHCBP1Q8NEM2 672 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 OR7A2PQ8NGA2 310 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 OR52E4Q8NGH9 312 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TBC1D20Q96BZ9 403 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TARS2Q9BW92 718 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ZNF717Q9BY31 904 aaPredicted RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ADAM33Q9BZ11 813 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 IKZF4Q9H2S9 585 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 BCAS3Q9H6U6 928 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 KCNQ5Q9NR82 932 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TMEM216Q9P0N5 145 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 MORF4L1Q9UBU8 362 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 PGAP2Q9UHJ9 254 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 STOML2Q9UJZ1 356 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 DICER1Q9UPY3 1922 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 A6NL46 340 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 LOC110117498-PIK3R3F6TDL0 507 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 EEF2KO00418 725 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 SDHDO14521 159 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TIPRLO75663 272 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 KCNH1O95259 989 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 HSPA4LO95757 839 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 SLC4A1P02730 911 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ALPLP05186 524 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ALPPP05187 535 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 RPS17P08708 135 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ENO3P13929 434 aaPredicted RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CD1EP15812 388 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 SPNP16150 400 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 PSMA4P25789 261 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 HLA-DMAP28067 261 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 PTGS2P35354 604 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 PRELPP51888 382 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 BMPR2Q13873 1038 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 STARD3Q14849 445 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 MFSD13AQ14CX5 517 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 AAK1Q2M2I8 961 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ATP13A4Q4VNC1 1196 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ODR4Q5SWX8 454 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 C6orf141Q5SZD1 244 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TTC23Q5W5X9 447 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 RNF19BQ6ZMZ0 732 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 STRADAQ7RTN6 431 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 ARFGAP1Q8N6T3 406 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 FAM181AQ8N9Y4 354 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 TXNDC5Q8NBS9 432 aaKnown RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CANT1Q8WVQ1 401 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CPA5Q8WXQ8 436 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 FIG4Q92562 907 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 PIK3R3Q92569 461 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 SLC10A4Q96EP9 437 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 OPALINQ96PE5 141 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 DEPDC7Q96QD5 511 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 DEFB129Q9H1M3 183 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 C2orf40Q9H1Z8 148 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 OPTCQ9UBM4 332 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 AP3M1Q9Y2T2 418 aa4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CAB39Q9Y376 341 aaPredicted RBP4.82□□□□□ -1.64
PRKD3-210ENST00000494667 CCDC78A2IDD5 438 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms