RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 IFT43Q96FT9 208 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 NAPGQ99747 312 aaPredicted RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 TRPM6Q9BX84 2022 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 SLC17A9Q9BYT1 436 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 PIH1D1Q9NWS0 290 aaKnown RBP11.18□□□□□ -0.62
APTX-230ENST00000494649 AMACRQ9UHK6 382 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 CD84Q9UIB8 345 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 SHOC2Q9UQ13 582 aa11.18□□□□□ -0.62
APTX-230ENST00000494649 KNL1Q8NG31 2342 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 FAM186AA6NE01 2351 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 ADAMTS9Q9P2N4 1935 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 LNP1A1A4G5 178 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 LATO43561 262 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 TSPAN6O43657 245 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 LZTS3O60299 673 aaPredicted RBP11.17□□□□□ -0.62
APTX-230ENST00000494649 STK10O94804 968 aaKnown RBP11.17□□□□□ -0.62
APTX-230ENST00000494649 METTL18O95568 372 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 WNT1P04628 370 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 ELFN1P0C7U0 828 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 GNSP15586 552 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 TGM1P22735 817 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 POLR2LP62875 67 aaKnown RBP11.17□□□□□ -0.62
APTX-230ENST00000494649 ELP6Q0PNE2 266 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 SGCGQ13326 291 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 TRIP13Q15645 432 aaPredicted RBP11.17□□□□□ -0.62
APTX-230ENST00000494649 OASLQ15646 514 aaKnown RBP11.17□□□□□ -0.62
APTX-230ENST00000494649 TMEM259Q4ZIN3 620 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 ARHGEF18Q6ZSZ5 1173 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 RFLNAQ6ZTI6 216 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 TRIM69Q86WT6 500 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 PRELID2Q8N945 189 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 C12orf50Q8NA57 414 aaPredicted RBP11.17□□□□□ -0.62
APTX-230ENST00000494649 C1orf216Q8TAB5 229 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 LOXL4Q96JB6 756 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 SPATA13Q96N96 652 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 FERMT1Q9BQL6 677 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 MLPHQ9BV36 600 aaPredicted RBP11.17□□□□□ -0.62
APTX-230ENST00000494649 GBA3Q9H227 469 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 GVINP1Q7Z2Y8 2422 aa11.17□□□□□ -0.62
APTX-230ENST00000494649 CTAGE9A4FU28 777 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 GOLGA6CA6NDK9 693 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 GOLGA6BA6NDN3 693 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 POM121BA6NF01 834 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 KHNYNO15037 678 aaKnown RBP11.16□□□□□ -0.62
APTX-230ENST00000494649 AP1G1O43747 822 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 TM7SF2O76062 418 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 AGTP01019 485 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 GOLGA6DP0CG33 693 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 VPS41P49754 854 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 CCR5P51681 352 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 WNT3AP56704 352 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 CDK18Q07002 472 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 ACOX1Q15067 660 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 CNGA3Q16281 694 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 AASDHQ4L235 1098 aaPredicted RBP11.16□□□□□ -0.62
APTX-230ENST00000494649 SETMARQ53H47 684 aaPredicted RBP11.16□□□□□ -0.62
APTX-230ENST00000494649 RALGPS1Q5JS13 557 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 LRRC66Q68CR7 880 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 KIAA1161Q6NSJ0 714 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 GSTA5Q7RTV2 222 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 PBKQ96KB5 322 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 MRGPRX2Q96LB1 330 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 VAT1Q99536 393 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 FSD1LQ9BXM9 530 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 MBNL1Q9NR56 388 aaKnown RBP11.16□□□□□ -0.62
APTX-230ENST00000494649 VPS45Q9NRW7 570 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 GOLGA6AQ9NYA3 693 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 FAM153AQ9UHL3 310 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 PHTF1Q9UMS5 762 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 FNDC3AQ9Y2H6 1198 aaKnown RBP11.16□□□□□ -0.62
APTX-230ENST00000494649 PCDHGA5Q9Y5G8 931 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 PI4KAP42356 2102 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 DCHS1Q96JQ0 3298 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 A0A0J9YYE9 177 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 A0A1B0GTW7 788 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 PGRMC1O00264 195 aaKnown RBP11.16□□□□□ -0.62
APTX-230ENST00000494649 CLDN7O95471 211 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 TRBC1P01850 177 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 PCCBP05166 539 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 ETV3P41162 512 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 STAT4Q14765 748 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 QPCTQ16769 361 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 DUOXA1Q1HG43 343 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 TTC27Q6P3X3 843 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 LIPIQ6XZB0 460 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 PRR23CQ6ZRP0 262 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 USP45Q70EL2 814 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 HSD11B1LQ7Z5J1 315 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 PELI3Q8N2H9 469 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 RASGEF1CQ8N431 466 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 CCDC89Q8N998 374 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 SCRN2Q96FV2 425 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 FCRL5Q96RD9 977 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 FICDQ9BVA6 458 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 IL21RQ9HBE5 538 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 TRHDEQ9UKU6 1024 aa11.16□□□□□ -0.62
APTX-230ENST00000494649 ZNF292O60281 2723 aa11.15□□□□□ -0.62
APTX-230ENST00000494649 C1orf232A0A0U1RR37 186 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms