RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ANXA6P08133 673 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 TGM2P21980 687 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 IL4RP24394 825 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 ITPKBP27987 946 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 GJC1P36383 396 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 EIF2S3P41091 472 aaKnown RBP9.65□□□□□ -0.86
MSH5-218ENST00000494646 RENBPP51606 427 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 CDH6P55285 790 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 MAXP61244 160 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 POLR2LP62875 67 aaKnown RBP9.65□□□□□ -0.86
MSH5-218ENST00000494646 ITKQ08881 620 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 KRT81Q14533 505 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 ZNF235Q14590 738 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 RFTN1Q14699 578 aaPredicted RBP9.65□□□□□ -0.86
MSH5-218ENST00000494646 RTP5Q14D33 572 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 PTPRRQ15256 657 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 ZSCAN23Q3MJ62 389 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 PERM1Q5SV97 790 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 DENND2CQ68D51 928 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 ZCCHC8Q6NZY4 707 aaKnown RBP9.65□□□□□ -0.86
MSH5-218ENST00000494646 GUSBP11Q6P575 273 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 LIPIQ6XZB0 460 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 MACC1Q6ZN28 852 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 PDZD3Q86UT5 571 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 PGBD5Q8N414 524 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.65□□□□□ -0.86
MSH5-218ENST00000494646 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 NXPE2Q96DL1 559 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 PSKH2Q96QS6 385 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 TUBGCP5Q96RT8 1024 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 LRRC61Q9BV99 259 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 NRSN2Q9GZP1 204 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 SCUBE2Q9NQ36 999 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 SIRPGQ9P1W8 387 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 SEPT3Q9UH03 358 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 SALL4Q9UJQ4 1053 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 DOLKQ9UPQ8 538 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 A0A0U1RQS6 177 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 EME2A4GXA9 379 aaPredicted RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 TMEM202A6NGA9 273 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 TMEM110-MUSTN1A8MSY1 372 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 TRAFD1O14545 582 aaPredicted RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 USP12O75317 370 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 CSO75390 466 aaKnown RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 MAP3K6O95382 1288 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 PEX11BO96011 259 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 TNFP01375 233 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 MPOP05164 745 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 ELFN1P0C7U0 828 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 GM2AP17900 193 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 HTR1BP28222 390 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 MMP12P39900 470 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 PEX5P50542 639 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 ZNF135P52742 658 aaPredicted RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 HK3P52790 923 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 SRP54P61011 504 aaKnown RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 SLC25A11Q02978 314 aaKnown RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 RALGDSQ12967 914 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 ACOX1Q15067 660 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 NR0B2Q15466 257 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 HADHQ16836 314 aaKnown RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 ALG11Q2TAA5 492 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 MARC1Q5VT66 337 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 CDCP2Q5VXM1 449 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 KCTD16Q68DU8 428 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 LRRC69Q6ZNQ3 347 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 SLC35F3Q8IY50 421 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 CACTIN-AS1Q8N1I8 211 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 PELI3Q8N2H9 469 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 ZNF564Q8TBZ8 553 aaPredicted RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 NSMCE1Q8WV22 266 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 GLMNQ92990 594 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 FUBP1Q96AE4 644 aaKnown RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 ECHDC3Q96DC8 303 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 NAF1Q96HR8 494 aaKnown RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 ZNF599Q96NL3 588 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 BOCQ9BWV1 1114 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 PACSIN1Q9BY11 444 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 NOD2Q9HC29 1040 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 NT5MQ9NPB1 228 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 MRPL40Q9NQ50 206 aaKnown RBP9.64□□□□□ -0.87
MSH5-218ENST00000494646 EVA1BQ9NVM1 165 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 CTTNBP2NLQ9P2B4 639 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 B4GALT6Q9UBX8 382 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 MOSPD1Q9UJG1 213 aa9.64□□□□□ -0.87
MSH5-218ENST00000494646 CFAP69A5D8W1 941 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 LMO7DNF2Z398 122 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 TOR1BO14657 336 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 TPP1O14773 563 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 RASGRP1O95267 797 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 GP1BAP07359 652 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 CTPS1P17812 591 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 CR2P20023 1033 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 BLKP51451 505 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 AP1S1P61966 158 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 CCDC173Q0VFZ6 552 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 NFATC4Q14934 902 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 AGERQ15109 404 aa9.63□□□□□ -0.87
MSH5-218ENST00000494646 ELOCQ15369 112 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms