RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 GBE1Q04446 702 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 FAXCQ5TGI0 409 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 LRRN4Q8WUT4 740 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 APOLD1Q96LR9 279 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 SPASTQ9UBP0 616 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 INTUQ9ULD6 942 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 PNMA8BQ9ULN7 279 aaPredicted RBP33.36■■■□□ 2.93
CBX4-203ENST00000494546 OR1A2Q9Y585 309 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 CSNK1G3Q9Y6M4 447 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 LRRK1Q38SD2 2015 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 MYF5P13349 255 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 JUPP14923 745 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 PEX5P50542 639 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 ACOX1Q15067 660 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 PRRT3Q5FWE3 981 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP33.35■■■□□ 2.93
CBX4-203ENST00000494546 RNF157Q96PX1 679 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 SEMA3CQ99985 751 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 APOOQ9BUR5 198 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 SLC13A1Q9BZW2 595 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 RBSNQ9H1K0 784 aa33.35■■■□□ 2.93
CBX4-203ENST00000494546 MATN3O15232 486 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 TNNT1P13805 278 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 MX2P20592 715 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 CCNCP24863 283 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 PPARDQ03181 441 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 C1orf61Q13536 156 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 PLA2G15Q8NCC3 412 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 SPOCK2Q92563 424 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 MAML1Q92585 1016 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 ANP32EQ9BTT0 268 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 POLR1EQ9GZS1 481 aaKnown RBP33.34■■■□□ 2.93
CBX4-203ENST00000494546 RBM22Q9NW64 420 aaKnown RBP eCLIP33.34■■■□□ 2.937e-7■■■■■ 27.3
CBX4-203ENST00000494546 PHTF1Q9UMS5 762 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 TTLL3Q9Y4R7 772 aa33.34■■■□□ 2.93
CBX4-203ENST00000494546 HTR1BP28222 390 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 HNF1BP35680 557 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 MAGEA1P43355 309 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 SLC10A2Q12908 348 aaPredicted RBP33.33■■■□□ 2.93
CBX4-203ENST00000494546 MTM1Q13496 603 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 NFATC4Q14934 902 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 DEFB133Q30KQ1 61 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 ARMC12Q5T9G4 340 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 HES3Q5TGS1 186 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 TSGA13Q96PP4 275 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 IL12RB2Q99665 862 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 HYOU1Q9Y4L1 999 aa33.33■■■□□ 2.93
CBX4-203ENST00000494546 PGLSO95336 258 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 KRT1P04264 644 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 CKMT1AP12532 417 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 NFKBIAP25963 317 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 VIPR1P32241 457 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 ENPP7Q6UWV6 458 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 HID1Q8IV36 788 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 FAM181AQ8N9Y4 354 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 CCNYQ8ND76 341 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 TRAF3IP1Q8TDR0 691 aaPredicted RBP33.32■■■□□ 2.92
CBX4-203ENST00000494546 ZNF830Q96NB3 372 aaPredicted RBP33.32■■■□□ 2.92
CBX4-203ENST00000494546 LRRC61Q9BV99 259 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 DTLQ9NZJ0 730 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 RAI2Q9Y5P3 530 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 USP24Q9UPU5 2620 aa33.32■■■□□ 2.92
CBX4-203ENST00000494546 CACNA1BQ00975 2339 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 GCATO75600 419 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 CCNB1P14635 433 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 ZNF75DP51815 510 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 TCEAL1Q15170 157 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 CNGA3Q16281 694 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 ODF2Q5BJF6 829 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 DENND2CQ68D51 928 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 ZCCHC8Q6NZY4 707 aaKnown RBP33.31■■■□□ 2.92
CBX4-203ENST00000494546 TSACCQ96A04 125 aaPredicted RBP33.31■■■□□ 2.92
CBX4-203ENST00000494546 MAK16Q9BXY0 300 aaKnown RBP33.31■■■□□ 2.92
CBX4-203ENST00000494546 CCDC86Q9H6F5 360 aaKnown RBP33.31■■■□□ 2.92
CBX4-203ENST00000494546 EVA1BQ9NVM1 165 aa33.31■■■□□ 2.92
CBX4-203ENST00000494546 IGF2RP11717 2491 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 TRABD2BA6NFA1 517 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 C3orf70A6NLC5 250 aaPredicted RBP33.3■■■□□ 2.92
CBX4-203ENST00000494546 SPOPO43791 374 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 CYP2A6P11509 494 aaPredicted RBP33.3■■■□□ 2.92
CBX4-203ENST00000494546 GM2AP17900 193 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 SLC1A1P43005 524 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 NOP2P46087 812 aaKnown RBP33.3■■■□□ 2.92
CBX4-203ENST00000494546 DSC2Q02487 901 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 LRRC38Q5VT99 294 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 RD3Q7Z3Z2 195 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 RHOT1Q8IXI2 618 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 MDM1Q8TC05 714 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 FATE1Q969F0 183 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 HDAC11Q96DB2 347 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 HAUS2Q9NVX0 235 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 HEY1Q9Y5J3 304 aa33.3■■■□□ 2.92
CBX4-203ENST00000494546 LY6G6EA0A0G2JKS1 128 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 HEXIM1O94992 359 aaKnown RBP33.29■■■□□ 2.92
CBX4-203ENST00000494546 CAPNS1P04632 268 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 CTPS1P17812 591 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 COMTP21964 271 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 BLKP51451 505 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 DUSP3P51452 185 aaPredicted RBP33.29■■■□□ 2.92
CBX4-203ENST00000494546 E2F1Q01094 437 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms