RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 LMAN2Q12907 356 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 TEAD2Q15562 447 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 TAF1BQ53T94 588 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-225ENST00000494465 SPNS2Q8IVW8 549 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 LMNTD2Q8IXW0 634 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 CMTM8Q8IZV2 173 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 GPR150Q8NGU9 434 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 FIBINQ8TAL6 211 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 RMDN1Q96DB5 314 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 ERP27Q96DN0 273 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 LMLNQ96KR4 655 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 LRRC37BQ96QE4 947 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 NDNQ99608 321 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 TMEM120AQ9BXJ8 343 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 ACOT9Q9Y305 439 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 RWDD3Q9Y3V2 267 aa16.6■□□□□ 0.25
ATG4B-225ENST00000494465 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 SMAD6O43541 496 aaKnown RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 DNAJC6O75061 913 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 LYPLA1O75608 230 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 PTPN2P17706 415 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 CRABP2P29373 138 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 CD70P32970 193 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 CLCN5P51795 746 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 SEMA3AQ14563 771 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 ATXN7L2Q5T6C5 722 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 LPCAT1Q8NF37 534 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 GABPB2Q8TAK5 448 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 MICAL1Q8TDZ2 1067 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 NLE1Q9NVX2 485 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 INTS6Q9UL03 887 aaKnown RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 ANKRD66B4E2M5 251 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 TARM1B6A8C7 271 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 TK2O00142 265 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 CLASP2O75122 1294 aaKnown RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 DNAJC8O75937 253 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 RHOP08100 348 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 RALBP11234 206 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 SLC1A6P48664 564 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 ARFIP2P53365 341 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 RHOAP61586 193 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 NCALDP61601 193 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 ITGA9Q13797 1035 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 TAF1AQ15573 450 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 ARID3BQ8IVW6 561 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 PPP1R14CQ8TAE6 165 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 CDKN2AIPNLQ96HQ2 116 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 SORT1Q99523 831 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 C2orf49Q9BVC5 232 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 TASP1Q9H6P5 420 aa16.59■□□□□ 0.25
ATG4B-225ENST00000494465 RUVBL2Q9Y230 463 aaKnown RBP16.59■□□□□ 0.25
ATG4B-225ENST00000494465 FZD6O60353 706 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 CRTAMO95727 393 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 GRK2P25098 689 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 HOXA9P31269 272 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 SLC8A1P32418 973 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 NAPRTQ6XQN6 538 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 CRLF3Q8IUI8 442 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 USP13Q92995 863 aaPredicted RBP16.58■□□□□ 0.25
ATG4B-225ENST00000494465 ACDQ96AP0 544 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 NXNL1Q96CM4 212 aa16.58■□□□□ 0.25
ATG4B-225ENST00000494465 CPSF2Q9P2I0 782 aaKnown RBP16.58■□□□□ 0.25
ATG4B-225ENST00000494465 CD3EAPO15446 510 aaKnown RBP16.58■□□□□ 0.24
ATG4B-225ENST00000494465 KLHL2O95198 593 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 FGF19O95750 216 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 MYL2P10916 166 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 DDX6P26196 483 aaKnown RBP eCLIP16.58■□□□□ 0.24
ATG4B-225ENST00000494465 SETDB1Q15047 1291 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 PTPRRQ15256 657 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 GLT6D1Q7Z4J2 308 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 MTDHQ86UE4 582 aaKnown RBP16.58■□□□□ 0.24
ATG4B-225ENST00000494465 MICALL1Q8N3F8 863 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 FSTL5Q8N475 847 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-225ENST00000494465 SKA1Q96BD8 255 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 KCNK4Q9NYG8 393 aa16.58■□□□□ 0.24
ATG4B-225ENST00000494465 KIAA1522Q9P206 1035 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-225ENST00000494465 MARCOQ9UEW3 520 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-225ENST00000494465 ATG2AQ2TAZ0 1938 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 ZNF821O75541 412 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-225ENST00000494465 WISP3O95389 354 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-225ENST00000494465 GLP2RO95838 553 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 APOA4P06727 396 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 GLRBP48167 497 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 PLK1P53350 603 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 NTHL1P78549 312 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 PLEKHG6Q3KR16 790 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 RALGPS1Q5JS13 557 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 PRSS36Q5K4E3 855 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 HECTD2Q5U5R9 776 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 FAM109BQ6ICB4 259 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-225ENST00000494465 LRRC8EQ6NSJ5 796 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 RETSATQ6NUM9 610 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 SPATA6LQ8N4H0 392 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 OR4K2Q8NGD2 314 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 OR4L1Q8NH43 312 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 ADGRE3Q9BY15 652 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 ECT2Q9H8V3 914 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 IGSF5Q9NSI5 407 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 OXSMQ9NWU1 459 aa16.57■□□□□ 0.24
ATG4B-225ENST00000494465 HEY2Q9UBP5 337 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms