RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 ERCC2P18074 760 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 TNFAIP3P21580 790 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 MIPP30301 263 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 CSNK1DP48730 415 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 SRP54P61011 504 aaKnown RBP9.17□□□□□ -0.94
NFIA-213ENST00000493627 SKOR1P84550 965 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 TYRO3Q06418 890 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 ASIC2Q16515 512 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 PPP6R3Q5H9R7 873 aaPredicted RBP9.17□□□□□ -0.94
NFIA-213ENST00000493627 CCDC183Q5T5S1 534 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 ERMARDQ5T6L9 678 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 AFMIDQ63HM1 303 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 KCTD16Q68DU8 428 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 FOXR1Q6PIV2 292 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 LVRNQ6Q4G3 990 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 PCSK4Q6UW60 755 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 ARHGAP36Q6ZRI8 547 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 CYP4V2Q6ZWL3 525 aaPredicted RBP9.17□□□□□ -0.94
NFIA-213ENST00000493627 RD3Q7Z3Z2 195 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 SRLQ86TD4 932 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 GKN2Q86XP6 184 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 ARL14Q8N4G2 192 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 ARFGAP1Q8N6T3 406 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 PAF1Q8N7H5 531 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 WDR36Q8NI36 951 aaKnown RBP9.17□□□□□ -0.94
NFIA-213ENST00000493627 FNIP1Q8TF40 1166 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 CCDC74AQ96AQ1 378 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 ECHDC3Q96DC8 303 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 PRR11Q96HE9 360 aaPredicted RBP9.17□□□□□ -0.94
NFIA-213ENST00000493627 SLC46A1Q96NT5 459 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 RBM15Q96T37 977 aaKnown RBP eCLIP9.17□□□□□ -0.94
NFIA-213ENST00000493627 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.17□□□□□ -0.94
NFIA-213ENST00000493627 DPH1Q9BZG8 443 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 TRIM7Q9C029 511 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 SLC24A3Q9HC58 644 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 FGF22Q9HCT0 170 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 PCSK1NQ9UHG2 260 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 GPR34Q9UPC5 381 aa9.17□□□□□ -0.94
NFIA-213ENST00000493627 ATMQ13315 3056 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 CFAP69A5D8W1 941 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 TMEM191CA6NGB0 347 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 CACNB4O00305 520 aaPredicted RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 TEX33O43247 280 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 LRCH4O75427 683 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 RNF8O76064 485 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 RECQL5O94762 991 aaPredicted RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 TNFSF15O95150 251 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 MBD3O95983 291 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 ITGA2BP08514 1039 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 ELFN1P0C7U0 828 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 MLLT3P42568 568 aaPredicted RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 KIAA1024LP59773 190 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 AP1S1P61966 158 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 RHDQ02161 417 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 BCL2L1Q07817 233 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 IL10RBQ08334 325 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 DSG2Q14126 1118 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 RFTN1Q14699 578 aaPredicted RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 TAF1BQ53T94 588 aaPredicted RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 ARHGAP40Q5TG30 622 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 E4F1Q66K89 784 aaPredicted RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 B3GNT8Q7Z7M8 397 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 CLEC14AQ86T13 490 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 PSTKQ8IV42 348 aaKnown RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 SDR16C5Q8N3Y7 309 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 PLA2G15Q8NCC3 412 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 OR1E3Q8WZA6 343 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 FUBP1Q96AE4 644 aaKnown RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 ZNF653Q96CK0 615 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 CCDC97Q96F63 343 aaPredicted RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 LIN37Q96GY3 246 aaPredicted RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 NAT10Q9H0A0 1025 aaKnown RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 HAUS4Q9H6D7 363 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 CNOT8Q9UFF9 292 aaKnown RBP9.16□□□□□ -0.94
NFIA-213ENST00000493627 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 DGKBQ9Y6T7 804 aa9.16□□□□□ -0.94
NFIA-213ENST00000493627 ZNF462Q96JM2 2506 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 LRP4O75096 1905 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 A0A1W2PQM1 296 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 TMEM202A6NGA9 273 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 H3BRJ5 948 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 TRAFD1O14545 582 aaPredicted RBP9.15□□□□□ -0.94
NFIA-213ENST00000493627 PLD2O14939 933 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 TNFP01375 233 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 FTLP02792 175 aaPredicted RBP9.15□□□□□ -0.94
NFIA-213ENST00000493627 RPLP0P05388 317 aaKnown RBP9.15□□□□□ -0.94
NFIA-213ENST00000493627 GM2AP17900 193 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 KELP23276 732 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 PRKCIP41743 596 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 SCNN1BP51168 640 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 ZNF135P52742 658 aaPredicted RBP9.15□□□□□ -0.94
NFIA-213ENST00000493627 POLR2LP62875 67 aaKnown RBP9.15□□□□□ -0.94
NFIA-213ENST00000493627 CCL7P80098 99 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 CFHR1Q03591 330 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 VAC14Q08AM6 782 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 NSUN2Q08J23 767 aaKnown RBP eCLIP9.15□□□□□ -0.94
NFIA-213ENST00000493627 SLC10A7Q0GE19 358 aa9.15□□□□□ -0.94
NFIA-213ENST00000493627 EIF3IQ13347 325 aaKnown RBP9.15□□□□□ -0.94
NFIA-213ENST00000493627 DPYSQ14117 519 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms