RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CHSY1Q86X52 802 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TDRPQ86YL5 185 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 OR8H2Q8N162 312 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 DHRSXQ8N5I4 330 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 SLC44A5Q8NCS7 719 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 OR2T34Q8NGX1 318 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TFB1MQ8WVM0 346 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 MASTLQ96GX5 879 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ZBED3Q96IU2 234 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CNDP1Q96KN2 507 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 OPALINQ96PE5 141 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF416Q9BWM5 594 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ROGDIQ9GZN7 287 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 GANQ9H2C0 597 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ING3Q9NXR8 418 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PCDHA6Q9UN73 950 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 MAPRE3Q9UPY8 281 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ANKRD6Q9Y2G4 727 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 DAGLAQ9Y4D2 1042 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PCDHA8Q9Y5H6 950 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 GTPBP10A4D1E9 387 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TTLL8A6PVC2 850 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 MINDY4BA8MYZ0 360 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CTDSP2O14595 271 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 RIMBP2O15034 1052 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 LYPLA1O75608 230 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 UPK1BO75841 260 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ECDO95905 644 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 RBP1P09455 135 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CYP2A6P11509 494 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TNNI1P19237 187 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CYP2A7P20853 494 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 NR2F2P24468 414 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 HTR7P34969 479 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CYP4F2P78329 520 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CYP4F3Q08477 520 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 GALNT2Q10471 571 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CDC20Q12834 499 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 BAATQ14032 418 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 BRMS1LQ5PSV4 323 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 STEAP3Q658P3 488 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PYHIN1Q6K0P9 492 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CASC4Q6P4E1 433 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 BBS12Q6ZW61 710 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF767PQ75MW2 155 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 KIF18BQ86Y91 864 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 RAB43Q86YS6 212 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 CDH26Q8IXH8 852 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 DSELQ8IZU8 1212 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 OLIG1Q8TAK6 271 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 SYTL5Q8TDW5 730 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PCNPQ8WW12 178 aaKnown RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 PBXIP1Q96AQ6 731 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TRIM43Q96BQ3 446 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 LHPPQ9H008 270 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 SLC6A15Q9H2J7 730 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 LRRC19Q9H756 370 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 RANGRFQ9HD47 186 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-205ENST00000493587 SMOXQ9NWM0 555 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 SIRT5Q9NXA8 310 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TAS2R14Q9NYV8 317 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 TAS2R7Q9NYW3 318 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 SLCO3A1Q9UIG8 710 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 BAIAP2Q9UQB8 552 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 GINS2Q9Y248 185 aa6.89□□□□□ -1.31
VPS13B-205ENST00000493587 OR6C65A6NJZ3 312 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 STX16-NPEPL1H3BU86 382 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 WWP2O00308 870 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 NEMP1O14524 444 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 NDUFA2O43678 99 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PLA2G6O60733 806 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF780AO75290 641 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 WBP4O75554 376 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 OR2B3O76000 313 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PLATP00750 562 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 MTHFD1P11586 935 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 SRCP12931 536 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 CD53P19397 219 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 GCAP28676 217 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 EPHX2P34913 555 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ABATP80404 500 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 TFAMQ00059 246 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 SLC12A1Q13621 1099 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 YIF1BQ5BJH7 314 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 FAM26FQ5R3K3 315 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 VWA5B1Q5TIE3 1220 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 LRRC8EQ6NSJ5 796 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 APOBEC3HQ6NTF7 200 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 RHPN2Q8IUC4 686 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 LYSMD2Q8IV50 215 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 PHTF2Q8N3S3 785 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 LNX2Q8N448 690 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ZCCHC9Q8N567 271 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 LNX1Q8TBB1 728 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 ST8SIA4Q92187 359 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 QKIQ96PU8 341 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 FYTTD1Q96QD9 318 aaKnown RBP6.88□□□□□ -1.31
VPS13B-205ENST00000493587 MMP19Q99542 508 aa6.88□□□□□ -1.31
VPS13B-205ENST00000493587 P2RX7Q99572 595 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms