RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 F5H423 210 aaPredicted RBP11.67□□□□□ -0.54
CTSA-209ENST00000493522 KCNN4O15554 427 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 SH3BP5O60239 455 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 RNGTTO60942 597 aaKnown RBP11.67□□□□□ -0.54
CTSA-209ENST00000493522 STK10O94804 968 aaKnown RBP11.67□□□□□ -0.54
CTSA-209ENST00000493522 FGGP02679 453 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 NFKB1P19838 968 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 CA4P22748 312 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 MAT2AP31153 395 aaKnown RBP11.67□□□□□ -0.54
CTSA-209ENST00000493522 CD86P42081 329 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 NIPAL4Q0D2K0 466 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 WASHC5Q12768 1159 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 ZSWIM9Q86XI8 627 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 NAXDQ8IW45 347 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 ZCCHC9Q8N567 271 aaKnown RBP11.67□□□□□ -0.54
CTSA-209ENST00000493522 CNTD1Q8N815 330 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 ATG4AQ8WYN0 398 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 RAB7BQ96AH8 199 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 NSMCE3Q96MG7 304 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 MIR1-1HGQ9H1L0 117 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 KDM4CQ9H3R0 1056 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 EIF2B4Q9UI10 523 aaKnown RBP11.67□□□□□ -0.54
CTSA-209ENST00000493522 GGT7Q9UJ14 662 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.67□□□□□ -0.54
CTSA-209ENST00000493522 PCDHGC4Q9Y5F7 938 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 RAI2Q9Y5P3 530 aa11.67□□□□□ -0.54
CTSA-209ENST00000493522 ZNF106Q9H2Y7 1883 aaKnown RBP11.66□□□□□ -0.54
CTSA-209ENST00000493522 A0A1W2PQU0 124 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
CTSA-209ENST00000493522 PRKCGP05129 697 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 IGHV4-34P06331 123 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 FTH1P19P0C7X4 201 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 TIMP2P16035 220 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 CES1P23141 567 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 MAOBP27338 520 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 CCR5P51681 352 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ELP6Q0PNE2 266 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 GRIK2Q13002 908 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 LONRF2Q1L5Z9 754 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 TEX44Q53QW1 395 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ARMC12Q5T9G4 340 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ITPRIPL1Q6GPH6 555 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 KIAA1161Q6NSJ0 714 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ERAP2Q6P179 960 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 TTC7BQ86TV6 843 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 TRIM69Q86WT6 500 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ZNF567Q8N184 647 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ARRDC2Q8TBH0 407 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 MAIP1Q8WWC4 291 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 C1orf54Q8WWF1 131 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ADAMTS14Q8WXS8 1223 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 BIRC7Q96CA5 298 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 ECHDC3Q96DC8 303 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 TRIM44Q96DX7 344 aaPredicted RBP11.66□□□□□ -0.54
CTSA-209ENST00000493522 PBKQ96KB5 322 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 TEKT5Q96M29 485 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 CAMK1GQ96NX5 476 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 RBM15Q96T37 977 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTSA-209ENST00000493522 VAT1Q99536 393 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 TDRD1Q9BXT4 1180 aaKnown RBP11.66□□□□□ -0.54
CTSA-209ENST00000493522 GLOD4Q9HC38 313 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 PCDH12Q9NPG4 1184 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 RSPH14Q9UHP6 348 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 DNPEPQ9ULA0 475 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 APOBEC2Q9Y235 224 aaKnown RBP11.66□□□□□ -0.54
CTSA-209ENST00000493522 FADS3Q9Y5Q0 445 aa11.66□□□□□ -0.54
CTSA-209ENST00000493522 TDRD6O60522 2096 aaKnown RBP11.66□□□□□ -0.54
CTSA-209ENST00000493522 LRP4O75096 1905 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 A0A1B0GTW7 788 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 A0A1W2PQ67 120 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 TAF4O00268 1085 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 TRAFD1O14545 582 aaPredicted RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 SPINT1O43278 529 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 HTRA2O43464 458 aaPredicted RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 TSPAN6O43657 245 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 AP1G1O43747 822 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 PGLSO95336 258 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 ITIH2P19823 946 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 MMP12P39900 470 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 SUOXP51687 545 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 EPHB1P54762 984 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 POLR2LP62875 67 aaKnown RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 SKOR1P84550 965 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 SEMG2Q02383 582 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 SNX1Q13596 522 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 PCSK7Q16549 785 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 UGP2Q16851 508 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 SETMARQ53H47 684 aaPredicted RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 SEL1L3Q68CR1 1132 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 PID1Q7Z2X4 250 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 PRPF39Q86UA1 669 aaKnown RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 HORMAD1Q86X24 394 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 LPCAT1Q8NF37 534 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 SLC35B2Q8TB61 432 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 HCAR2Q8TDS4 363 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 CXorf40AQ8TE69 158 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 KLK6Q92876 244 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 IMP4Q96G21 291 aaKnown RBP11.65□□□□□ -0.54
CTSA-209ENST00000493522 SPATA13Q96N96 652 aa11.65□□□□□ -0.54
CTSA-209ENST00000493522 WDR24Q96S15 920 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms