RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 MAGEC1O60732 1142 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 PMPCBO75439 489 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 MT-CYBP00156 380 aaPredicted RBP14.03□□□□□ -0.16
CCM2-217ENST00000492883 FGGP02679 453 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 ALPIP09923 528 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 ELFN1P0C7U0 828 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 C6P13671 934 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 VIPR1P32241 457 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 HNF1BP35680 557 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 CLDN2P57739 230 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 RPL26P61254 145 aaKnown RBP14.03□□□□□ -0.16
CCM2-217ENST00000492883 GNG11P61952 73 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 RALGDSQ12967 914 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 GRIK2Q13002 908 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 ARHGEF7Q14155 803 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 ACOX1Q15067 660 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 KIF19Q2TAC6 998 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 ANKRD20A2Q5SQ80 823 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 ANKRD20A1Q5TYW2 823 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 ANKRD20A3Q5VUR7 823 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 IL27RAQ6UWB1 636 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 LIPIQ6XZB0 460 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 DPPA4Q7L190 304 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 FAM71DQ8N9W8 422 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 SLC35B2Q8TB61 432 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 C1orf54Q8WWF1 131 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 ATG4AQ8WYN0 398 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 KLHDC7BQ96G42 594 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 PBKQ96KB5 322 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 LENG8Q96PV6 779 aaPredicted RBP14.03□□□□□ -0.16
CCM2-217ENST00000492883 USP29Q9HBJ7 922 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 TMEM9BQ9NQ34 198 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 FAM153AQ9UHL3 310 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 RPL26L1Q9UNX3 145 aaKnown RBP14.03□□□□□ -0.16
CCM2-217ENST00000492883 PPIL1Q9Y3C6 166 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 HS3ST3A1Q9Y663 406 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 EML5Q05BV3 1969 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 NUP205Q92621 2012 aa14.02□□□□□ -0.16
CCM2-217ENST00000492883 A0A0J9YYE9 177 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 A0A1W2PR77 199 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 C5orf60A6NFR6 353 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 ANKRD66B4E2M5 251 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 RAD51BO15315 384 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 LIASO43766 372 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 PRLP01236 227 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 TRBC1P01850 177 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 WNT1P04628 370 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 ATP1A1P05023 1023 aaKnown RBP14.02□□□□□ -0.17
CCM2-217ENST00000492883 CDK18Q07002 472 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 OVGP1Q12889 678 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 SNX1Q13596 522 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 GALNT3Q14435 633 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 PRPSAP1Q14558 356 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 PTPRRQ15256 657 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 SLC14A2Q15849 920 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 DENND2CQ68D51 928 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 IQCHQ86VS3 1027 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 TMEM145Q8NBT3 493 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 FAM174AQ8TBP5 190 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 CCDC110Q8TBZ0 833 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 TADA1Q96BN2 335 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 SPATA13Q96N96 652 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 TMEM121Q9BTD3 319 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 MLPHQ9BV36 600 aaPredicted RBP14.02□□□□□ -0.17
CCM2-217ENST00000492883 GBA3Q9H227 469 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 ZNF148Q9UQR1 794 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 SNX11Q9Y5W9 270 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 ABCA7Q8IZY2 2146 aa14.02□□□□□ -0.17
CCM2-217ENST00000492883 NPIPB15A6NHN6 443 aaPredicted RBP14.01□□□□□ -0.17
CCM2-217ENST00000492883 A6NNZ2 444 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 C4orf47A7E2U8 309 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 H0Y8X5 98 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 CDX4O14627 284 aaPredicted RBP14.01□□□□□ -0.17
CCM2-217ENST00000492883 OPHN1O60890 802 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 ANXA9O76027 345 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 RECQL5O94762 991 aaPredicted RBP14.01□□□□□ -0.17
CCM2-217ENST00000492883 HEXIM1O94992 359 aaKnown RBP14.01□□□□□ -0.17
CCM2-217ENST00000492883 THEGLP0DJG4 465 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 STIP1P31948 543 aaKnown RBP14.01□□□□□ -0.17
CCM2-217ENST00000492883 GEMP55040 296 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 WNT3AP56704 352 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 BNC1Q01954 994 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 MPP3Q13368 585 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 LRRC14Q15048 493 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 CNGA3Q16281 694 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 CCNG2Q16589 344 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 QPCTQ16769 361 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 HLA-BQ31612 363 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 UAP1L1Q3KQV9 507 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 STPG1Q5TH74 334 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 Q6ZSR6 202 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 TSPAN33Q86UF1 283 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 MINDY1Q8N5J2 469 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 DENND6BQ8NEG7 585 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 IPMKQ8NFU5 416 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 OR2I1PQ8NGU4 316 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 NETO1Q8TDF5 533 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 CENPTQ96BT3 561 aa14.01□□□□□ -0.17
CCM2-217ENST00000492883 BMFQ96LC9 184 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms