RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 KLHL35Q6PF15 583 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 Q6ZSV7 163 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 TRILQ7L0X0 811 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 IRF2BP2Q7Z5L9 587 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 PATL1Q86TB9 770 aaKnown RBP4.09□□□□□ -1.75
CLK1-213ENST00000492793 HAPLN4Q86UW8 402 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 SFTPA2Q8IWL1 248 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 TEX45Q8NA69 505 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 SCCPDHQ8NBX0 429 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 HUS1BQ8NHY5 278 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 ARRDC2Q8TBH0 407 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 ERGIC1Q969X5 290 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 MMABQ96EY8 250 aaPredicted RBP4.09□□□□□ -1.75
CLK1-213ENST00000492793 CMTM3Q96MX0 182 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 TKTL2Q9H0I9 626 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 MUC13Q9H3R2 512 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 SYNCQ9H7C4 482 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 SLC28A3Q9HAS3 691 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 SCPEP1Q9HB40 452 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 PLAC1Q9HBJ0 212 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 GPR108Q9NPR9 543 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 RCOR1Q9UKL0 485 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 ZNF215Q9UL58 517 aaPredicted RBP4.09□□□□□ -1.75
CLK1-213ENST00000492793 FZD10Q9ULW2 581 aa4.09□□□□□ -1.75
CLK1-213ENST00000492793 LY6G6EA0A0G2JKS1 128 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 A6NCN8 305 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 LIPT2A6NK58 231 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 VWA5AO00534 786 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 UTYO14607 1347 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 ASAP2O43150 1006 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 PAGE4O60829 102 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 PTP4A3O75365 173 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 SLC25A12O75746 678 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 MLYCDO95822 493 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 CRYABP02511 175 aaKnown RBP4.08□□□□□ -1.76
CLK1-213ENST00000492793 MMP2P08253 660 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 ZNF182P17025 639 aaPredicted RBP4.08□□□□□ -1.76
CLK1-213ENST00000492793 NAGAP17050 411 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 TNFRSF1BP20333 461 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 SHMT1P34896 483 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 RPL3P39023 403 aaKnown RBP4.08□□□□□ -1.76
CLK1-213ENST00000492793 PIK3CAP42336 1068 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 NR4A2P43354 598 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 RASSF2P50749 326 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 SRSF1Q07955 248 aaKnown RBP eCLIP4.08□□□□□ -1.76
CLK1-213ENST00000492793 CSTF3Q12996 717 aaKnown RBP4.08□□□□□ -1.76
CLK1-213ENST00000492793 TRAF1Q13077 416 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 LAMB3Q13751 1172 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 CRYMQ14894 314 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 MMEL1Q495T6 779 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 RILPL1Q5EBL4 403 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 GKAP1Q5VSY0 366 aaPredicted RBP4.08□□□□□ -1.76
CLK1-213ENST00000492793 DAB2IPQ5VWQ8 1189 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 C11orf87Q6NUJ2 197 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 CFAP161Q6P656 301 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 TMEM154Q6P9G4 183 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 NCEH1Q6PIU2 408 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 CLEC4GQ6UXB4 293 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 FASTKD5Q7L8L6 764 aaKnown RBP4.08□□□□□ -1.76
CLK1-213ENST00000492793 SHFQ7M4L6 423 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 PCGF5Q86SE9 256 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 ZNF575Q86XF7 245 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 SLC35F3Q8IY50 421 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 TEX11Q8IYF3 940 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 WDTC1Q8N5D0 677 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 BEST2Q8NFU1 509 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 TRIB2Q92519 343 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 SMG7Q92540 1137 aaKnown RBP4.08□□□□□ -1.76
CLK1-213ENST00000492793 MAP7D2Q96T17 732 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 NCAPGQ9BPX3 1015 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 MSTO1Q9BUK6 570 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 NDST4Q9H3R1 872 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 PLEKHA4Q9H4M7 779 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 TERF2IPQ9NYB0 399 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 OR6C3Q9NZP0 311 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 CACNA1IQ9P0X4 2223 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 CNOT8Q9UFF9 292 aaKnown RBP4.08□□□□□ -1.76
CLK1-213ENST00000492793 VPS28Q9UK41 221 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 GPR34Q9UPC5 381 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 ERVK-11Q9UQG0 969 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 PTGDR2Q9Y5Y4 395 aa4.08□□□□□ -1.76
CLK1-213ENST00000492793 FAM237AA0A1B0GTK4 181 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 A0A1B0GVT2 93 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 OR6C75A6NL08 312 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 H3BQ06 376 aaPredicted RBP4.07□□□□□ -1.76
CLK1-213ENST00000492793 KLK8O60259 260 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 NDUFB4O95168 129 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 LDHCP07864 332 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 HOXB5P09067 269 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 ALOX12P18054 663 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 GALCP54803 685 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 SNX16P57768 344 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 PRAMEP78395 509 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 PRKG2Q13237 762 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 OLIG2Q13516 323 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 NAB2Q15742 525 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 ZNF260Q3ZCT1 412 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 HIST2H2BCQ6DN03 193 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 HIST2H2BDQ6DRA6 164 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 ARHGAP12Q8IWW6 846 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms