RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 RBFAQ8N0V3 343 aa24.79■■□□□ 1.56
UPF3A-209ENST00000492270 CCNYQ8ND76 341 aa24.79■■□□□ 1.56
UPF3A-209ENST00000492270 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.79■■□□□ 1.56
UPF3A-209ENST00000492270 SPOCK2Q92563 424 aa24.79■■□□□ 1.56
UPF3A-209ENST00000492270 GATA6Q92908 595 aa24.79■■□□□ 1.56
UPF3A-209ENST00000492270 POLR1EQ9GZS1 481 aaKnown RBP24.79■■□□□ 1.56
UPF3A-209ENST00000492270 TCEAL2Q9H3H9 227 aaPredicted RBP24.79■■□□□ 1.56
UPF3A-209ENST00000492270 RBM22Q9NW64 420 aaKnown RBP eCLIP24.79■■□□□ 1.562e-10■■■■■ 44.4
UPF3A-209ENST00000492270 DDX56Q9NY93 547 aaKnown RBP24.79■■□□□ 1.56
UPF3A-209ENST00000492270 SALL4Q9UJQ4 1053 aa24.79■■□□□ 1.56
UPF3A-209ENST00000492270 MSRB2Q9Y3D2 182 aa24.79■■□□□ 1.56
UPF3A-209ENST00000492270 TTLL3Q9Y4R7 772 aa24.79■■□□□ 1.56
UPF3A-209ENST00000492270 ALG6Q9Y672 507 aa24.79■■□□□ 1.56
UPF3A-209ENST00000492270 RCCD1A6NED2 376 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 APOL1O14791 398 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 NEBLO76041 1014 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 RECQL5O94762 991 aaPredicted RBP24.78■■□□□ 1.56
UPF3A-209ENST00000492270 PCCBP05166 539 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 PDHA1P08559 390 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 CCNB1P14635 433 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 MX2P20592 715 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 ACADVLP49748 655 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 HNRNPKP61978 463 aaKnown RBP eCLIP24.78■■□□□ 1.56
UPF3A-209ENST00000492270 YPEL5P62699 121 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 DYNLT1P63172 113 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 PROX2Q3B8N5 592 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 DHRS13Q6UX07 377 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 UNQ6494/PRO21346Q6UXR6 183 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 RAD9BQ6WBX8 426 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 NYAP1Q6ZVC0 841 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 VSIG1Q86XK7 387 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 MARCH9Q86YJ5 346 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 RFX6Q8HWS3 928 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 CCDC13Q8IYE1 715 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 PLA2G15Q8NCC3 412 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 ZNF548Q8NEK5 533 aaPredicted RBP24.78■■□□□ 1.56
UPF3A-209ENST00000492270 OR4C6Q8NH72 309 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 FATE1Q969F0 183 aa24.78■■□□□ 1.56
UPF3A-209ENST00000492270 ZNF830Q96NB3 372 aaPredicted RBP24.78■■□□□ 1.56
UPF3A-209ENST00000492270 REXO2Q9Y3B8 237 aaKnown RBP24.78■■□□□ 1.56
UPF3A-209ENST00000492270 EPN1Q9Y6I3 576 aaPredicted RBP24.78■■□□□ 1.56
UPF3A-209ENST00000492270 CFAP69A5D8W1 941 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 FAM221BA6H8Z2 402 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 KCNK1O00180 336 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 PGLSO95336 258 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 JUNDP17535 347 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 MARCKSL1P49006 195 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 PPIDQ08752 370 aaKnown RBP24.77■■□□□ 1.56
UPF3A-209ENST00000492270 PTK2BQ14289 1009 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 INPP5AQ14642 412 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 LLGL1Q15334 1064 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 CNGA3Q16281 694 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 ALG1LQ6GMV1 187 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 MACC1Q6ZN28 852 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 TMTC1Q8IUR5 882 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 SMIM14Q96QK8 99 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 MAK16Q9BXY0 300 aaKnown RBP24.77■■□□□ 1.56
UPF3A-209ENST00000492270 OR1A2Q9Y585 309 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 RAI2Q9Y5P3 530 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 EPG5Q9HCE0 2579 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 USP24Q9UPU5 2620 aa24.77■■□□□ 1.56
UPF3A-209ENST00000492270 IGF2RP11717 2491 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 A0A0A6YYK5 440 aaPredicted RBP24.76■■□□□ 1.55
UPF3A-209ENST00000492270 A0A1W2PQ67 120 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 H3BM21 787 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 PSTPIP1O43586 416 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 CTPS1P17812 591 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 LHCGRP22888 699 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 CLDN6P56747 220 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 NIPAL4Q0D2K0 466 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 ZBTB17Q13105 803 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 ZNF211Q13398 564 aaPredicted RBP24.76■■□□□ 1.55
UPF3A-209ENST00000492270 ODF2Q5BJF6 829 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 ARMC12Q5T9G4 340 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 B4GALNT4Q76KP1 1039 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 ARRDC2Q8TBH0 407 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 ANP32EQ9BTT0 268 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 PHTF1Q9UMS5 762 aa24.76■■□□□ 1.55
UPF3A-209ENST00000492270 A0A0U1RQS6 177 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 NPIPB15A6NHN6 443 aaPredicted RBP24.75■■□□□ 1.55
UPF3A-209ENST00000492270 TOR1BO14657 336 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 FZD6O60353 706 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 RFPL3O75679 317 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 JCHAINP01591 159 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 ALPIP09923 528 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 MYF5P13349 255 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 KRT10P13645 584 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 VIPR1P32241 457 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 CDKN2BP42772 138 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 ACOX1Q15067 660 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 DENND2CQ68D51 928 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 C11orf63Q6NUN7 778 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 TSPAN33Q86UF1 283 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 PHACTR4Q8IZ21 702 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 PELI3Q8N2H9 469 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 ACRBPQ8NEB7 543 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 PIH1D2Q8WWB5 315 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 COQ10AQ96MF6 247 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 OLFM3Q96PB7 478 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 APOOQ9BUR5 198 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms