RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 MGME1Q9BQP7 344 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 TM6SF2Q9BZW4 377 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 PREBQ9HCU5 417 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 HAUS2Q9NVX0 235 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 IL36AQ9UHA7 158 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 WASF2Q9Y6W5 498 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 CES2O00748 559 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 MTSS1O43312 755 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 RFPL3O75679 317 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 LDOC1O95751 146 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 ATP1A1P05023 1023 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 C1SP09871 688 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 CCNB1P14635 433 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 CR2P20023 1033 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 CHRNA3P32297 505 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 MMP13P45452 471 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 CLDN6P56747 220 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 OTUD4Q01804 1114 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 CYP4F3Q08477 520 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 COL28A1Q2UY09 1125 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 SETMARQ53H47 684 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 RALGPS1Q5JS13 557 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 CCDC181Q5TID7 509 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 SLC13A5Q86YT5 568 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 PDCD7Q8N8D1 485 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 ACTL9Q8TC94 416 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 TFB1MQ8WVM0 346 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 ARRDC3Q96B67 414 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 TRIM44Q96DX7 344 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 IL12RB2Q99665 862 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 HEPHQ9BQS7 1158 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 OSBPL1AQ9BXW6 950 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 FRMD8P1Q9BZ68 369 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 CPEB1Q9BZB8 566 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 SCUBE2Q9NQ36 999 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 HECAQ9UBI9 543 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 CA5BQ9Y2D0 317 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 ZKSCAN5Q9Y2L8 839 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 ACACAQ13085 2346 aa15.15■□□□□ 0.02
CDC42SE1-205ENST00000491825 PRAMEF26H0Y7S4 382 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 MUSKO15146 869 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 BNIP3LO60238 219 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 POP4O95707 220 aaKnown RBP15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 GNG11P61952 73 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 AP1S1P61966 158 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 AP1B1Q10567 949 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 GRM3Q14832 879 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 MYLK3Q32MK0 819 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 NEK5Q6P3R8 708 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 CHST14Q8NCH0 376 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 HAUS1Q96CS2 278 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 PBKQ96KB5 322 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 TUBGCP5Q96RT8 1024 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 POLR1EQ9GZS1 481 aaKnown RBP15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 TTC7AQ9ULT0 858 aaPredicted RBP15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 SNX12Q9UMY4 172 aa15.14■□□□□ 0.01
CDC42SE1-205ENST00000491825 TP53BP1Q12888 1972 aaPredicted RBP15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 KCNK1O00180 336 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 KPNA3O00505 521 aaPredicted RBP15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 MAGEC1O60732 1142 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 RNGTTO60942 597 aaKnown RBP15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 CDK4P11802 303 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 PRLRP16471 622 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 RGRP47804 291 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 RAD51Q06609 339 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 STAT4Q14765 748 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 ZNF284Q2VY69 593 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 PROX2Q3B8N5 592 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 ATXN7L2Q5T6C5 722 aaPredicted RBP15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 FBXL19Q6PCT2 694 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 PDZD3Q86UT5 571 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 HORMAD1Q86X24 394 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 CDKL3Q8IVW4 592 aaPredicted RBP15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 C17orf53Q8N3J3 647 aaPredicted RBP15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 PGBD5Q8N414 524 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 RASGEF1CQ8N431 466 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 OR6K2Q8NGY2 324 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 SLC35B2Q8TB61 432 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 GRIN3AQ8TCU5 1115 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 MAIP1Q8WWC4 291 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 PPP1R16AQ96I34 528 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 EXOC2Q96KP1 924 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 NUDCD1Q96RS6 583 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 WDR24Q96S15 920 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 VAT1Q99536 393 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 ZFR2Q9UPR6 939 aaKnown RBP15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 ATP8A1Q9Y2Q0 1164 aa15.13■□□□□ 0.01
CDC42SE1-205ENST00000491825 ANKRD36A6QL64 1941 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 A0A087WV48 116 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 A0A1W2PQU0 124 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 TCRBV7S2A1N4TA0A589 114 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 KRIT1O00522 736 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 SDC3O75056 442 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 LEFTY1O75610 366 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 RBP3P10745 1247 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 TCP1P17987 556 aaKnown RBP15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 CES1P23141 567 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms