RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 GRID2IPA4D2P6 1211 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 IGLON5A6NGN9 336 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 C16orf96A6NNT2 1141 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 KRIT1O00522 736 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 KDELR3O43731 214 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 AP1G1O43747 822 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 BRINP1O60477 761 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 GSRP00390 522 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 UGT2B4P06133 528 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 MX2P20592 715 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 AMPD1P23109 780 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 IGFALSP35858 605 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 RPS21P63220 83 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 DAB2P98082 770 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 RTP5Q14D33 572 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 RPS6KA1Q15418 735 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 KIF26BQ2KJY2 2108 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 TFDP3Q5H9I0 405 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 TMCO4Q5TGY1 634 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 CCDC181Q5TID7 509 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 NYAP1Q6ZVC0 841 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 NT5DC3Q86UY8 548 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 RFX6Q8HWS3 928 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 KATNAL2Q8IYT4 538 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 RBFAQ8N0V3 343 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 BBS5Q8N3I7 341 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 DCBLD1Q8N8Z6 715 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 ZNF548Q8NEK5 533 aaPredicted RBP11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 OR2AP1Q8NGE2 309 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 FAM71BQ8TC56 605 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 CASKIN2Q8WXE0 1202 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 APOLD1Q96LR9 279 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 KLHL32Q96NJ5 620 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 CSPG4P5Q96PW8 444 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 TCEAL2Q9H3H9 227 aaPredicted RBP11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 DNAJC28Q9NX36 388 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 TRMT1Q9NXH9 659 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 TRIM10Q9UDY6 481 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 EFR3BQ9Y2G0 817 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 AK5Q9Y6K8 562 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 ASXL3Q9C0F0 2248 aa11.13□□□□□ -0.63
TMEM39A-211ENST00000491685 PTPRQQ9UMZ3 2332 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 RP1P56715 2156 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 SPTY2D1-AS1A0A0U1RR47 76 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 K7ESM1 405 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 APOL1O14791 398 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 ATXN7O15265 892 aaPredicted RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 INSIG1O15503 277 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 TMCC1O94876 653 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 TJP3O95049 919 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 MT-CO3P00414 261 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 PRB1P04280 392 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 ALPPL2P10696 532 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 NME1P15531 152 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 TCF4P15884 667 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 CTNNA1P35221 906 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 EIF2S3P41091 472 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 ABCG1P45844 678 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 ARSEP51690 589 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 RAD51Q06609 339 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 EIF2B5Q13144 721 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 PDE1CQ14123 709 aaPredicted RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 DPYSL3Q14195 570 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 ZNF805Q5CZA5 627 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 CDCP2Q5VXM1 449 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 TXNRD3NBQ6F5E7 133 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 CYP4V2Q6ZWL3 525 aaPredicted RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 DCP2Q8IU60 420 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 SLC39A7Q92504 469 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 RAPGEF5Q92565 580 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 ISG20Q96AZ6 181 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 HMCESQ96FZ2 354 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 FEM1CQ96JP0 617 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 EXOC2Q96KP1 924 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 C1QTNF2Q9BXJ5 285 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 NRSN2Q9GZP1 204 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 KCNF1Q9H3M0 494 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 NLGN3Q9NZ94 848 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 RAI2Q9Y5P3 530 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 HS3ST3A1Q9Y663 406 aa11.12□□□□□ -0.63
TMEM39A-211ENST00000491685 NAV2Q8IVL1 2488 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 RASA4BC9J798 803 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 DFFAO00273 331 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 AREL1O15033 823 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 RASA4O43374 803 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 ZNF500O60304 480 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 OPA1O60313 960 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 ZNF189O75820 626 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 PIGNO95427 931 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 FTCDO95954 541 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 CSF2P04141 144 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 CKMT1AP12532 417 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 PLA2G2AP14555 144 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 IL4RP24394 825 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 RABIFP47224 123 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 NR2C2P49116 596 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 PFN3P60673 137 aa11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 SNRPD1P62314 119 aaKnown RBP11.11□□□□□ -0.63
TMEM39A-211ENST00000491685 RFTN1Q14699 578 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms