RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 UBE4BO95155 1302 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SPATA31A1Q5TZJ5 1347 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 COL5A2P05997 1499 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PAPPAQ13219 1627 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF142P52746 1687 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF831Q5JPB2 1677 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ROBO3Q96MS0 1386 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 DUOX1Q9NRD9 1551 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 C10orf71Q711Q0 1435 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 A0A1W2PPL8 197 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZSCAN5CA6NGD5 496 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LINC01548A6NM66 108 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 H0YCG3 227 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TRAFD1O14545 582 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TRDMT1O14717 391 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LIN7AO14910 233 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CLIC2O15247 247 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MSH4O15457 936 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 RIPK2O43353 540 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC37A4O43826 429 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZC3H11AO75152 810 aaKnown RBP eCLIP2.12□□□□□ -2.074e-6■■□□□ 13.1
SNRNP40-207ENST00000491106 CDH16O75309 829 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TBCAO75347 108 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PSMD10O75832 226 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 DCTN3O75935 186 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TJP3O95049 919 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZWINTO95229 277 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 RASAL1O95294 804 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LYPLA2O95372 231 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 GCNT3O95395 438 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TDP2O95551 362 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 GAS8O95995 478 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LDHAP00338 332 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SERPINB2P05120 415 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CYP1A2P05177 515 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 RPSAP08865 295 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 IL6RP08887 468 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 POLR2MP0CAP2 368 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MYBL1P10243 752 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PF4V1P10720 104 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PIM1P11309 404 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ACTN1P12814 892 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 EEF2P13639 858 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 BRAFP15056 766 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ACADSP16219 412 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TSHRP16473 764 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CHRNB2P17787 502 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CALB2P22676 271 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 IVDP26440 423 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 IL1R2P27930 398 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ADORA2AP29274 412 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TKTP29401 623 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LRPAP1P30533 357 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 STIP1P31948 543 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 STX2P32856 288 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MSH2P43246 934 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CASP4P49662 377 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 GPC3P51654 580 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 VAMP7P51809 220 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MAP2K6P52564 334 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 UCP3P55916 312 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LOXL3P58215 753 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SUMO2P61956 95 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 IRX1P78414 480 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 GTF2BQ00403 316 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SP2Q02086 613 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 GHRHRQ02643 423 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 PPP2R5CQ13362 524 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 FHL1Q13642 323 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 KLF9Q13886 244 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SPARCL1Q14515 664 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MESDQ14696 234 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 MLC1Q15049 377 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TRIP6Q15654 476 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 KYNUQ16719 465 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SUPT20HL1Q3ZLR7 823 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC45A4Q5BKX6 768 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CMPK2Q5EBM0 449 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 WASHC2DQ5SRD0 308 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LGSNQ5TDP6 509 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 SEL1L2Q5TEA6 688 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CACHD1Q5VU97 1274 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 NUGGCQ68CJ6 796 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 LMBRD2Q68DH5 695 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF425Q6IV72 752 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 C11orf63Q6NUN7 778 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TATDN1Q6P1N9 297 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM65Q6PI78 240 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 USP17L6PQ6QN14 398 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZDHHC24Q6UX98 284 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF783Q6ZMS7 281 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 RGS9BPQ6ZS82 235 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM179Q6ZVK1 233 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 ASRGL1Q7L266 308 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 OTUD6AQ7L8S5 288 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 NIPA1Q7RTP0 329 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 TBC1D1Q86TI0 1168 aaPredicted RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CAND1Q86VP6 1230 aaKnown RBP2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 CHSY1Q86X52 802 aa2.12□□□□□ -2.07
SNRNP40-207ENST00000491106 VSIG1Q86XK7 387 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms