RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	LIMK1	P53667	647 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	SKOR1	P84550	965 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	WASHC5	Q12768	1159 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	SGCG	Q13326	291 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	PCSK7	Q16549	785 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	TPRG1L	Q5T0D9	272 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	ARMC12	Q5T9G4	340 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	ERAP2	Q6P179	960 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	DPPA4	Q7L190	304 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	KDELC2	Q7Z4H8	507 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	TSPAN33	Q86UF1	283 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	SPATA22	Q8NHS9	363 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	PDLIM2	Q96JY6	352 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	MBNL1	Q9NR56	388 aa	Known RBP	18.67	■□□□□ 0.58
C4A-256	ENST00000490663	UBP1	Q9NZI7	540 aa		18.67	■□□□□ 0.58
C4A-256	ENST00000490663	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.67	■□□□□ 0.58
C4A-256	ENST00000490663	TLR4	O00206	839 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	GM2A	P17900	193 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	NFKB1	P19838	968 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	LHCGR	P22888	699 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	NXPH1	P58417	271 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	EIF3E	P60228	445 aa	Known RBP	18.66	■□□□□ 0.58
C4A-256	ENST00000490663	GALNT3	Q14435	633 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	IRF4	Q15306	451 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	SLC45A4	Q5BKX6	768 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	LIPI	Q6XZB0	460 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	SLC22A18AS	Q8N1D0	253 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	MFSD2A	Q8NA29	543 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	LPCAT1	Q8NF37	534 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	HCAR2	Q8TDS4	363 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	KLHDC7B	Q96G42	594 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	BMF	Q96LC9	184 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	CAMK1G	Q96NX5	476 aa		18.66	■□□□□ 0.58
C4A-256	ENST00000490663	TDRD1	Q9BXT4	1180 aa	Known RBP	18.66	■□□□□ 0.58
C4A-256	ENST00000490663	COL5A1	P20908	1838 aa	Predicted RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663	GIPC1	O14908	333 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	LZTS3	O60299	673 aa	Predicted RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663	FZD6	O60353	706 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	CER1	O95813	267 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	MT-CYB	P00156	380 aa	Predicted RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663	ELFN1	P0C7U0	828 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	CD68	P34810	354 aa	Predicted RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663	NUDT1	P36639	197 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	CETN2	P41208	172 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	GSE1	Q14687	1217 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	CNGA3	Q16281	694 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	RALGPS1	Q5JS13	557 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	MEI1	Q5TIA1	1274 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	NYAP1	Q6ZVC0	841 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	GATAD2A	Q86YP4	633 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	ZNF567	Q8N184	647 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	TP53I13	Q8NBR0	393 aa	Predicted RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663	DEFB124	Q8NES8	71 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	PIH1D2	Q8WWB5	315 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	ANP32B	Q92688	251 aa	Known RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663	RTKN	Q9BST9	563 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	ZDHHC5	Q9C0B5	715 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	GLOD4	Q9HC38	313 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	TM7SF3	Q9NS93	570 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	DNAAF2	Q9NVR5	837 aa	Known RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663	KLHL8	Q9P2G9	620 aa	Predicted RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663	AMACR	Q9UHK6	382 aa		18.65	■□□□□ 0.58
C4A-256	ENST00000490663	TPX2	Q9ULW0	747 aa	Known RBP	18.65	■□□□□ 0.58
C4A-256	ENST00000490663		A6NNZ2	444 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	TM4SF5	O14894	197 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	SDC3	O75056	442 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	PRL	P01236	227 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	PCCB	P05166	539 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	RBP3	P10745	1247 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	CD59	P13987	128 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	VIPR1	P32241	457 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	EPHB1	P54762	984 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	PUM1	Q14671	1186 aa	Known RBP eCLIP	18.64	■□□□□ 0.57
C4A-256	ENST00000490663	ACOX1	Q15067	660 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	SHB	Q15464	509 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	ZNF423	Q2M1K9	1284 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	TEX44	Q53QW1	395 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	ZNF542P	Q5EBM4	170 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	ZNF662	Q6ZS27	426 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663		Q6ZSR6	202 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	RFLNA	Q6ZTI6	216 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	BZW1	Q7L1Q6	419 aa	Known RBP	18.64	■□□□□ 0.57
C4A-256	ENST00000490663	PELI3	Q8N2H9	469 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	PLA2G15	Q8NCC3	412 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	HTR3C	Q8WXA8	447 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	ATG4A	Q8WYN0	398 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	IMP4	Q96G21	291 aa	Known RBP	18.64	■□□□□ 0.57
C4A-256	ENST00000490663	ALS2CR12	Q96Q35	445 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	PCDH9	Q9HC56	1237 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	GDF3	Q9NR23	364 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	TRMT1	Q9NXH9	659 aa	Known RBP	18.64	■□□□□ 0.57
C4A-256	ENST00000490663	PHTF1	Q9UMS5	762 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	BTBD3	Q9Y2F9	522 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	CACNA1A	O00555	2505 aa		18.64	■□□□□ 0.57
C4A-256	ENST00000490663	PIKFYVE	Q9Y2I7	2098 aa		18.63	■□□□□ 0.57
C4A-256	ENST00000490663	FPGT	O14772	594 aa		18.63	■□□□□ 0.57
C4A-256	ENST00000490663	PMPCB	O75439	489 aa		18.63	■□□□□ 0.57
C4A-256	ENST00000490663	RECQL5	O94762	991 aa	Predicted RBP	18.63	■□□□□ 0.57
C4A-256	ENST00000490663	TJP3	O95049	919 aa		18.63	■□□□□ 0.57
C4A-256	ENST00000490663	PIRT	P0C851	137 aa		18.63	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms