RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 LOC285556D6RIA3 1793 aa5.19□□□□□ -1.58
SSX2IP-208ENST00000490476 PTPRQQ9UMZ3 2332 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 TLN1Q9Y490 2541 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 CLRN2A0PK11 232 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 GRID2IPA4D2P6 1211 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 PI4KAP2A4QPH2 592 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 C16orf96A6NNT2 1141 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 MGST3O14880 152 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 PER2O15055 1255 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 CCNT1O60563 726 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 TIPRLO75663 272 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 TIMP1P01033 207 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 HSP90AA1P07900 732 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 RFPL3SP0C7P2 107 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 UBL4AP11441 157 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 CSF2RAP15509 400 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 ATF7P17544 494 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 CHMP24386 653 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 NAP1L1P55209 391 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 SIM1P81133 766 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 HOXA4Q00056 320 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 SETQ01105 290 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 DCTN2Q13561 401 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 ERV3-1Q14264 604 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 IL13RA2Q14627 380 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 LARS2Q15031 903 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 PFKFB3Q16875 520 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 ANXA2RQ3ZCQ2 193 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 CEP85Q6P2H3 762 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 VSTM1Q6UX27 236 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 AMIGO2Q86SJ2 522 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 ZNF366Q8N895 744 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 NFKBIDQ8NI38 313 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 ZCCHC10Q8TBK6 192 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 ADAMTS15Q8TE58 950 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 GDPD5Q8WTR4 605 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 NCSTNQ92542 709 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 CNOT9Q92600 299 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 CELF1Q92879 486 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 CUL5Q93034 780 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 SH3KBP1Q96B97 665 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 ZNF845Q96IR2 970 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 HIC2Q96JB3 615 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 PDLIM2Q96JY6 352 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 ADAD1Q96M93 576 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 TIGD1Q96MW7 591 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 FYTTD1Q96QD9 318 aaKnown RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 NUAK2Q9H093 628 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 LMAN2LQ9H0V9 348 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 SLC32A1Q9H598 525 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 TTC12Q9H892 705 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 SEMA4BQ9NPR2 832 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 FBXO4Q9UKT5 387 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 RABGAP1Q9Y3P9 1069 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 RAI2Q9Y5P3 530 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 SIRT4Q9Y6E7 314 aaPredicted RBP5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 R4GN57 208 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 KAT6AQ92794 2004 aa5.18□□□□□ -1.58
SSX2IP-208ENST00000490476 F5H0A9 414 aaPredicted RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 NARSO43776 548 aaKnown RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 UFL1O94874 794 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 URODP06132 367 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 HOXB9P17482 250 aaPredicted RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 GPTP24298 496 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 ZNF84P51523 738 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 ARF3P61204 181 aaPredicted RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 ARF1P84077 181 aaKnown RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 TAP1Q03518 808 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 PPATQ06203 517 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 ANGPT1Q15389 498 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 GLE1Q53GS7 698 aaKnown RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 SUSD4Q5VX71 490 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 NAPEPLDQ6IQ20 393 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 SLC30A9Q6PML9 568 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 RANBP10Q6VN20 620 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 NEK10Q6ZWH5 1172 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 TMTC3Q6ZXV5 915 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 FASTKD5Q7L8L6 764 aaKnown RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 GRASPQ7Z6J2 395 aaPredicted RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 GALNT7Q86SF2 657 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 ANKRD13CQ8N6S4 541 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 TNIP2Q8NFZ5 429 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 METTL6Q8TCB7 284 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 ADAMTS18Q8TE60 1221 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 CLSTN3Q9BQT9 956 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 NPLQ9BXD5 320 aaPredicted RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 SLC22A11Q9NSA0 550 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 BEX4Q9NWD9 120 aaPredicted RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 ZDHHC7Q9NXF8 308 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 SLC25A10Q9UBX3 287 aaPredicted RBP5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 PKP3Q9Y446 797 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 SMCHD1A6NHR9 2005 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 ACACAQ13085 2346 aa5.17□□□□□ -1.58
SSX2IP-208ENST00000490476 TEX13CA0A0J9YWL9 993 aa5.16□□□□□ -1.58
SSX2IP-208ENST00000490476 TCRBV7S3A2A0A539 114 aa5.16□□□□□ -1.58
SSX2IP-208ENST00000490476 TCRBV5S1A1TA0A578 114 aa5.16□□□□□ -1.58
SSX2IP-208ENST00000490476 MCIDASD6RGH6 385 aa5.16□□□□□ -1.58
SSX2IP-208ENST00000490476 J3QKU1 62 aa5.16□□□□□ -1.58
SSX2IP-208ENST00000490476 STRNO43815 780 aa5.16□□□□□ -1.58
SSX2IP-208ENST00000490476 DOK2O60496 412 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms