RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 FAM90A8PA6NJQ4 464 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 SH3BP5O60239 455 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 ZIC3O60481 467 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 NDUFB4O95168 129 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 CH25HO95992 272 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 GLUD1P00367 558 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 CYC1P08574 325 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 FAM90A13PP0C7W8 464 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 FAM90A24PP0C7X0 464 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 G6PDP11413 515 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 IL7RP16871 459 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 TNFRSF8P28908 595 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 PBX3P40426 434 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 EIF2S3P41091 472 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 KCNJ4P48050 445 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 GLUD2P49448 558 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 RARSP54136 660 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 RPS3AP61247 264 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 DDR1Q08345 913 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 DSC1Q08554 894 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 KRT32Q14532 448 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 EFNB3Q15768 340 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 EIF2S3LQ2VIR3 472 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 HAUS3Q68CZ6 603 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 FAM180BQ6P0A1 224 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 QSOX2Q6ZRP7 698 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 CCDC129Q6ZRS4 1044 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 ZC3HC1Q86WB0 502 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 IQCF1Q8N6M8 205 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 GTF3C6Q969F1 213 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 OTULINQ96BN8 352 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 LYZL4Q96KX0 146 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 TMEM204Q9BSN7 226 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 RANBP17Q9H2T7 1088 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 SLC9A2Q9UBY0 812 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 ZNF69Q9UC07 566 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 RCOR1Q9UKL0 485 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 AGO1Q9UL18 857 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 CDC14AQ9UNH5 594 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 PAM16Q9Y3D7 125 aa4.58□□□□□ -1.68
PRPF4B-207ENST00000490399 LACTBL1A8MY62 500 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 USP17L23D6RBM5 183 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 TAF4O00268 1085 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 KCNJ13O60928 360 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 SERPINI2O75830 405 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 PRSS2P07478 247 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 MMP2P08253 660 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 ZNF12P17014 697 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 SSTR2P30874 369 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 PIP4K2AP48426 406 aaPredicted RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 CEBPZQ03701 1054 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 LTBQ06643 244 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 FRG1Q14331 258 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 PAPPA-AS1Q5QFB9 102 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 TSSK4Q6SA08 328 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 MTSS1LQ765P7 747 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 RSRC2Q7L4I2 434 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 CCDC13Q8IYE1 715 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 CLIP4Q8N3C7 705 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 BEST2Q8NFU1 509 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 ELP5Q8TE02 316 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 PSPC1Q8WXF1 523 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 WASF1Q92558 559 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 RND1Q92730 232 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 INTS12Q96CB8 462 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 THOC3Q96J01 351 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 C7orf26Q96N11 449 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 SEZ6LQ9BYH1 1024 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 KCNN2Q9H2S1 579 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 ESRP2Q9H6T0 727 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 PRKRIP1Q9H875 184 aaPredicted RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 SCPEP1Q9HB40 452 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 NOX4Q9NPH5 578 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 MKKSQ9NPJ1 570 aaPredicted RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 GPR108Q9NPR9 543 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 OLA1Q9NTK5 396 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 HAO1Q9UJM8 370 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 FBXO9Q9UK97 447 aaPredicted RBP4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 SLC45A1Q9Y2W3 748 aa4.57□□□□□ -1.68
PRPF4B-207ENST00000490399 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 CLEC18AA5D8T8 446 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 TMEM202A6NGA9 273 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 EIF3CLB5ME19 914 aaKnown RBP4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 IKBKBO14920 756 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 SEC14L2O76054 403 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 CLEC3BP05452 202 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 CHATP28329 748 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 CDAP32320 146 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 MAN1A1P33908 653 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 ARL1P40616 181 aaPredicted RBP4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 GABRB2P47870 512 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 OLR1P78380 273 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 GRSF1Q12849 480 aaKnown RBP eCLIP4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 NAE1Q13564 534 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 DHX34Q14147 1143 aaKnown RBP4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 NEDD9Q14511 834 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 ZNF585BQ52M93 769 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 CCDC30Q5VVM6 783 aa4.56□□□□□ -1.68
PRPF4B-207ENST00000490399 FAAH2Q6GMR7 532 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms