RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CYP3A5P20815 502 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 ATXN7L2Q5T6C5 722 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-205ENST00000490035 TFAP2DQ7Z6R9 452 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 SAMD14Q8IZD0 417 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-205ENST00000490035 CERKQ8TCT0 537 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 STYXQ8WUJ0 223 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 C15orf40Q8WUR7 153 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 ELMO1Q92556 727 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 PGRMC2O15173 223 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 PSMD10O75832 226 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 SEC24AO95486 1093 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 DHFRP00374 187 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 ITGA2BP08514 1039 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 PSMB4P28070 264 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 GRIA3P42263 894 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 USP46P62068 366 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 BMPR2Q13873 1038 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 FAM189A2Q15884 450 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 USP41Q3LFD5 358 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 ZFPM1Q8IX07 1006 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 ASZ1Q8WWH4 475 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 ROGDIQ9GZN7 287 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 SUV39H1O43463 412 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 B4GALT4O60513 344 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 RFX3P48380 749 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 RASGEF1CQ8N431 466 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.88□□□□□ -0.99
LSAMP-205ENST00000490035 KIAA1522Q9P206 1035 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-205ENST00000490035 SLC22A3O75751 556 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 NUDT14O95848 222 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 CHRNGP07510 517 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 SOX11P35716 441 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 PLIN5Q00G26 463 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 ATP13A4Q4VNC1 1196 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 OR4L1Q8NH43 312 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 MAGEE2Q8TD90 523 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-205ENST00000490035 UBASH3BQ8TF42 649 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 TBCDQ9BTW9 1192 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 KLQ9UEF7 1012 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 TFR2Q9UP52 801 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 hCG_1818297A0A087WSY0 165 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 FGBP02675 491 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 GPIP06744 558 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 NR2F1P10589 423 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 LY6KQ17RY6 165 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 KLHL24Q6TFL4 600 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 TMEM192Q8IY95 271 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 TRPV3Q8NET8 790 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 NACC2Q96BF6 587 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 REXO5Q96IC2 774 aaKnown RBP8.88□□□□□ -0.99
LSAMP-205ENST00000490035 LMAN2LQ9H0V9 348 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 FBXO10Q9UK96 956 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 RFXANKO14593 260 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 CST1P01037 141 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 PDK3Q15120 406 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 AP5B1Q2VPB7 878 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 SPATS1Q496A3 300 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 TAPT1Q6NXT6 567 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 FAM117BQ6P1L5 589 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 TMEM199Q8N511 208 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 PPTC7Q8NI37 304 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 ROPN1LQ96C74 230 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 TBC1D10AQ9BXI6 508 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 CCNYL3P0C7X3 344 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 BDNFP23560 247 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 UNC5AQ6ZN44 842 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 GLB1L3Q8NCI6 653 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-205ENST00000490035 VPS35Q96QK1 796 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 BLOC1S4Q9NUP1 217 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 GRIN2DO15399 1336 aa8.88□□□□□ -0.99
LSAMP-205ENST00000490035 SMIM35A0A1B0GVV1 85 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 OR10H2O60403 315 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ANPEPP15144 967 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 GRM5P41594 1212 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 NAGLUP54802 743 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 YBEYP58557 167 aaPredicted RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 MRPS22P82650 360 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 MTM1Q13496 603 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 AUHQ13825 339 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 SLC39A12Q504Y0 691 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 SEZ6Q53EL9 994 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ZHX1-C8orf76Q96EF9 292 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 CAPN10Q9HC96 672 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 TMEM39AQ9NV64 488 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 THUMPD1Q9NXG2 353 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 CALML5Q9NZT1 146 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 COLEC10Q9Y6Z7 277 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 BAZ2AQ9UIF9 1905 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 RICTORQ6R327 1708 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 COL5A2P05997 1499 aaPredicted RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 NR4A1P22736 598 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 FCHO2Q0JRZ9 810 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 MKRN4PQ13434 485 aaPredicted RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 TEAD4Q15561 434 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 CLCC1Q96S66 551 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 NXF3Q9H4D5 531 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 GPATCH2LQ9NWQ4 482 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 UBIAD1Q9Y5Z9 338 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 KCNK1O00180 336 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 AZIN1O14977 448 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms