RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SLC31A1O15431 190 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 TSPAN6O43657 245 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 HYAL3O43820 417 aaPredicted RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 MAFKO60675 156 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 IGSF6O95976 241 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 RBP3P10745 1247 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 HNRNPA2B1P22626 353 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 SERPINB6P35237 376 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 GARSP41250 739 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 RXRGP48443 463 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 PAPOLAP51003 745 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 GDF10P55107 478 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 EIF3EP60228 445 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 RHOAP61586 193 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 RPS21P63220 83 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 PPIDQ08752 370 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 XRCC4Q13426 336 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 SNX1Q13596 522 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 ZNF284Q2VY69 593 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 TMEM259Q4ZIN3 620 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 LEKR1Q6ZMV7 388 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 PARS2Q7L3T8 475 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 RAB44Q7Z6P3 723 aaPredicted RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 ZC3H18Q86VM9 953 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 MMGT1Q8N4V1 131 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 GLIS1Q8NBF1 620 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 TTC13Q8NBP0 860 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 TMEM145Q8NBT3 493 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 OR6K2Q8NGY2 324 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 FAM174AQ8TBP5 190 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 SLCO2A1Q92959 643 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 HDAC11Q96DB2 347 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 KLHDC7BQ96G42 594 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 FEM1CQ96JP0 617 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 TSGA13Q96PP4 275 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 LGMNQ99538 433 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 FRMD8P1Q9BZ68 369 aaPredicted RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 PDFQ9HBH1 243 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 PCYOX1Q9UHG3 505 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 ZFR2Q9UPR6 939 aaKnown RBP10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 BTBD3Q9Y2F9 522 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 FADS3Q9Y5Q0 445 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 PLXNA2O75051 1894 aa10.66□□□□□ -0.7
SCAMP4-208ENST00000489554 FAM221BA6H8Z2 402 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 ARHGAP42A6NI28 874 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 J3KR12 359 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 TNFSF14O43557 240 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 TOP3BO95985 862 aaKnown RBP10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 UGT2B4P06133 528 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 ITGAVP06756 1048 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 SPINK2P20155 84 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 RBL1P28749 1068 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 EPHA8P29322 1005 aaPredicted RBP10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 FNTAP49354 379 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 IL9RQ01113 521 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 GRM3Q14832 879 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 BRD3Q15059 726 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 SHBQ15464 509 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 ERCC6LQ2NKX8 1250 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 ATXN7L2Q5T6C5 722 aaPredicted RBP10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 SEL1L3Q68CR1 1132 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 UNQ6494/PRO21346Q6UXR6 183 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 GDPD4Q6W3E5 623 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 PRUNE1Q86TP1 453 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 SPATS2Q86XZ4 545 aaKnown RBP10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 CHCHD4Q8N4Q1 142 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 SAP25Q8TEE9 199 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 FATE1Q969F0 183 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 MAGOHBQ96A72 148 aaKnown RBP10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 RTP4Q96DX8 246 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 UBA2Q9UBT2 640 aaPredicted RBP10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 FTSJ1Q9UET6 329 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 DRG1Q9Y295 367 aaKnown RBP10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 MSRB2Q9Y3D2 182 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 HS3ST3A1Q9Y663 406 aa10.65□□□□□ -0.7
SCAMP4-208ENST00000489554 TMEM8BA6NDV4 472 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 HACD1B0YJ81 288 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 DFFAO00273 331 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 NEMP1O14524 444 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 RAD51CO43502 376 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 PRAMEF11O60813 436 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 DKK1O94907 266 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 PROS1P07225 676 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 THEGLP0DJG4 465 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 GKP32189 559 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 ABL2P42684 1182 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 SUOXP51687 545 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 MRPS25P82663 173 aaKnown RBP10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 WASHC5Q12768 1159 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 ZBTB17Q13105 803 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 SGCGQ13326 291 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 PDK1Q15118 436 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 ST3GAL2Q16842 350 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 MAP9Q49MG5 647 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 PRAMEF14Q5SWL7 426 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 TEX35Q5T0J7 233 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 CCDC137Q6PK04 289 aaKnown RBP10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 ABI3BPQ7Z7G0 1075 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 SLCO6A1Q86UG4 719 aa10.64□□□□□ -0.71
SCAMP4-208ENST00000489554 GATAD2AQ86YP4 633 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms