RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SCRN2Q96FV2 425 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 OSBPL8Q9BZF1 889 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 SEPT10Q9P0V9 454 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 PPIL1Q9Y3C6 166 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 POM121BA6NF01 834 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 HACD1B0YJ81 288 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 FLRT2O43155 660 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 FZD6O60353 706 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 TJP3O95049 919 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 PYGMP11217 842 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 CYP2A6P11509 494 aaPredicted RBP17.43■□□□□ 0.38
MDC1-206ENST00000489540 PECAM1P16284 738 aaPredicted RBP17.43■□□□□ 0.38
MDC1-206ENST00000489540 RPL26P61254 145 aaKnown RBP17.43■□□□□ 0.38
MDC1-206ENST00000489540 NIPAL4Q0D2K0 466 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 XRCC4Q13426 336 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 LRRC14Q15048 493 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 LIPIQ6XZB0 460 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 USP45Q70EL2 814 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 PTAR1Q7Z6K3 402 aaPredicted RBP17.43■□□□□ 0.38
MDC1-206ENST00000489540 NAXDQ8IW45 347 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.43■□□□□ 0.38
MDC1-206ENST00000489540 DEFB124Q8NES8 71 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 PIH1D2Q8WWB5 315 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 IFT43Q96FT9 208 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 B4GALT6Q9UBX8 382 aa17.43■□□□□ 0.38
MDC1-206ENST00000489540 RPL26L1Q9UNX3 145 aaKnown RBP17.43■□□□□ 0.38
MDC1-206ENST00000489540 KNL1Q8NG31 2342 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 FTCDO95954 541 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 ELFN1P0C7U0 828 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 VIPR1P32241 457 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 PFN3P60673 137 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 YPEL5P62699 121 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 CCZ1BP86790 482 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 CCZ1P86791 482 aaPredicted RBP17.42■□□□□ 0.38
MDC1-206ENST00000489540 SEMG2Q02383 582 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 RALGDSQ12967 914 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 PSAPL1Q6NUJ1 521 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 ZC3H18Q86VM9 953 aaKnown RBP17.42■□□□□ 0.38
MDC1-206ENST00000489540 TP53I13Q8NBR0 393 aaPredicted RBP17.42■□□□□ 0.38
MDC1-206ENST00000489540 SETD7Q8WTS6 366 aaKnown RBP17.42■□□□□ 0.38
MDC1-206ENST00000489540 ANP32BQ92688 251 aaKnown RBP17.42■□□□□ 0.38
MDC1-206ENST00000489540 HES6Q96HZ4 224 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 AGAP3Q96P47 875 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 MCCC1Q96RQ3 725 aaPredicted RBP17.42■□□□□ 0.38
MDC1-206ENST00000489540 TDRD1Q9BXT4 1180 aaKnown RBP17.42■□□□□ 0.38
MDC1-206ENST00000489540 GPR27Q9NS67 375 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 KCTD5Q9NXV2 234 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 CAPN6Q9Y6Q1 641 aa17.42■□□□□ 0.38
MDC1-206ENST00000489540 DDX3YO15523 660 aaKnown RBP17.41■□□□□ 0.38
MDC1-206ENST00000489540 ITGAVP06756 1048 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 PDHA1P08559 390 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 KCNA4P22459 653 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 CD86P42081 329 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 EPHB1P54762 984 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 SKOR1P84550 965 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 PTK2BQ14289 1009 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 SHBQ15464 509 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 WSCD2Q2TBF2 565 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 INAVAQ3KP66 663 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 B4GALNT4Q76KP1 1039 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 RHBDD1Q8TEB9 315 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 HAUS1Q96CS2 278 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 TEKT5Q96M29 485 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 VAT1Q99536 393 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 FERMT1Q9BQL6 677 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 SLC25A51Q9H1U9 297 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 MBNL1Q9NR56 388 aaKnown RBP17.41■□□□□ 0.38
MDC1-206ENST00000489540 PCOLCE2Q9UKZ9 415 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 CHKBQ9Y259 395 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 COQ6Q9Y2Z9 468 aa17.41■□□□□ 0.38
MDC1-206ENST00000489540 DMXL1Q9Y485 3027 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 SPTY2D1-AS1A0A0U1RR47 76 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 A8MX80 341 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 PSMD11O00231 422 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 RECQL5O94762 991 aaPredicted RBP17.4■□□□□ 0.38
MDC1-206ENST00000489540 HEXIM1O94992 359 aaKnown RBP17.4■□□□□ 0.38
MDC1-206ENST00000489540 MMP2P08253 660 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 PTPN3P26045 913 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 IGFALSP35858 605 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 GRK6P43250 576 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 IL9RQ01113 521 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 PDE1CQ14123 709 aaPredicted RBP17.4■□□□□ 0.38
MDC1-206ENST00000489540 ARHGEF7Q14155 803 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 IHHQ14623 411 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 IRF4Q15306 451 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 SLC14A2Q15849 920 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 SLC22A18ASQ8N1D0 253 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 CBARPQ8N350 705 aaPredicted RBP17.4■□□□□ 0.38
MDC1-206ENST00000489540 SAP25Q8TEE9 199 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 IMP4Q96G21 291 aaKnown RBP17.4■□□□□ 0.38
MDC1-206ENST00000489540 QKIQ96PU8 341 aaKnown RBP eCLIP17.4■□□□□ 0.38
MDC1-206ENST00000489540 CDC6Q99741 560 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 ADGRE3Q9BY15 652 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 GLOD4Q9HC38 313 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 PCDH9Q9HC56 1237 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 DNPEPQ9ULA0 475 aa17.4■□□□□ 0.38
MDC1-206ENST00000489540 PACSIN2Q9UNF0 486 aaPredicted RBP17.4■□□□□ 0.38
MDC1-206ENST00000489540 H7C0C1 242 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 GIPC1O14908 333 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 CBFA2T3O75081 653 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms