RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ARHGAP10A1A4S6 786 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 SLC35F4A4IF30 521 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 TMEM110-MUSTN1A8MSY1 372 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 B4E171 279 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 RNF225M0QZC1 329 aaPredicted RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 POLR2DO15514 142 aaKnown RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 SART1O43290 800 aaKnown RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 CALUO43852 315 aaPredicted RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 ZMPSTE24O75844 475 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 DNAJB5O75953 348 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 ADCY5O95622 1261 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 TNFP01375 233 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 THRAP10827 490 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 HTR1BP28222 390 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 CCR1P32246 355 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 CSF2RBP32927 897 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 TSPAN7P41732 249 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 RPL34P49207 117 aaKnown RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 SERPINH1P50454 418 aaKnown RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 ENPEPQ07075 957 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 ABHD18Q0P651 414 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 DPYDQ12882 1025 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 LRMPQ12912 555 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 TRA2AQ13595 282 aaKnown RBP eCLIP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 INPP5JQ15735 1006 aaPredicted RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 C5orf22Q49AR2 442 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 ZNF805Q5CZA5 627 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 TMEM270Q6UE05 265 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 KDELC2Q7Z4H8 507 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 ZNF438Q7Z4V0 828 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 PCDH20Q8N6Y1 951 aaKnown RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 SPON2Q9BUD6 331 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 APOOQ9BUR5 198 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 C1QTNF7Q9BXJ2 289 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 TM6SF2Q9BZW4 377 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 CEP44Q9C0F1 390 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 TMEM168Q9H0V1 697 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 MAGEF1Q9HAY2 307 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 POPDC2Q9HBU9 364 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 MRPL40Q9NQ50 206 aaKnown RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 ST7Q9NRC1 585 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 EXOC1Q9NV70 894 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 DDIT4Q9NX09 232 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 HECAQ9UBI9 543 aaPredicted RBP9.25□□□□□ -0.93
SSBP1-212ENST00000489378 COQ6Q9Y2Z9 468 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 SNX10Q9Y5X0 201 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 DGKBQ9Y6T7 804 aa9.25□□□□□ -0.93
SSBP1-212ENST00000489378 CROCCQ5TZA2 2017 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 RHPN2P1A8MT19 583 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 HNRNPRO43390 633 aaKnown RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 PAGE1O75459 146 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 UGT2B4P06133 528 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 PAEPP09466 180 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 SLC2A3P11169 496 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 PSMC2P35998 433 aaKnown RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 NASPP49321 788 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 PMS2P54278 862 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 RAB15P59190 212 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 YWHAZP63104 245 aaKnown RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 ARF5P84085 180 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 ERV3-1Q14264 604 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 INPP5AQ14642 412 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 NAA30Q147X3 362 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 NR1D2Q14995 579 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 LRRC14Q15048 493 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 CLPPQ16740 277 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 CBWD6Q4V339 395 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 CBWD3Q5JTY5 395 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 CBWD5Q5RIA9 395 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 TFAP2DQ7Z6R9 452 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 C17orf82Q86X59 251 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 IRF2BP1Q8IU81 584 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 TP53INP2Q8IXH6 220 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 ZNF683Q8IZ20 524 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 SLC34A3Q8N130 599 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 RYBPQ8N488 228 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 LINC00301Q8NCQ3 95 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 OR4D9Q8NGE8 314 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 EPS8L1Q8TE68 723 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 CXorf40AQ8TE69 158 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 FUBP1Q96AE4 644 aaKnown RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 RNF31Q96EP0 1072 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 POM121Q96HA1 1249 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 WDR92Q96MX6 357 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 TRIM62Q9BVG3 475 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 SIK2Q9H0K1 926 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 FGF22Q9HCT0 170 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 SPATS2LQ9NUQ6 558 aaKnown RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 LUZP4Q9P127 313 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 OAS3Q9Y6K5 1087 aaKnown RBP9.24□□□□□ -0.93
SSBP1-212ENST00000489378 POLEQ07864 2286 aa9.24□□□□□ -0.93
SSBP1-212ENST00000489378 ABCA2Q9BZC7 2435 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 TMEM202A6NGA9 273 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 I6L893 689 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-212ENST00000489378 KRIT1O00522 736 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 STK17BO94768 372 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 CD160O95971 181 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 STAT5AP42229 794 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 GPD2P43304 727 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms