RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 LOC285095A0A1B0GVY8 99 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 CAPN14A8MX76 684 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 DLL1O00548 723 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 FCHO1O14526 889 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 MAN1A2O60476 641 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 MAGEC1O60732 1142 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 RAMP2O60895 175 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 USP12O75317 370 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 CSPG5O95196 566 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 CXCL14O95715 111 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 GLP2RO95838 553 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 PENKP01210 267 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 FGF1P05230 155 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 HLA-DQB2P05538 268 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 C2P06681 752 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 KRT16P08779 473 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 OR4Q2P0C623 313 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 ESRRAP11474 423 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 SNRPBP14678 240 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 STMN1P16949 149 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 PRDX6P30041 224 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 ATP5C1P36542 298 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 ARCN1P48444 511 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 SERPINH1P50454 418 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 CLCN5P51795 746 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 CCNG1P51959 295 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 RAB10P61026 200 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 ABCE1P61221 599 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 NAA20P61599 178 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TFF2Q03403 129 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 ACVR1Q04771 509 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 OVGP1Q12889 678 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TAF10Q12962 218 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 SERINC3Q13530 473 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 THOC5Q13769 683 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 DDR2Q16832 855 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 USP41Q3LFD5 358 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 FSCBQ5H9T9 825 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 RABGAP1LQ5R372 815 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 SH2D4BQ5SQS7 431 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 C10orf120Q5SQS8 335 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 WLSQ5T9L3 541 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 LILRA6Q6PI73 481 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 ZYG11AQ6WRX3 759 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF783Q6ZMS7 281 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 CHST9Q7L1S5 443 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 OTOP3Q7RTS5 596 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TMC7Q7Z402 723 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TMPRSS6Q8IU80 811 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 UNC5BQ8IZJ1 945 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 EFHBQ8N7U6 833 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 IPMKQ8NFU5 416 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 VN1R2Q8NFZ6 395 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 PPP2R3CQ969Q6 453 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 FEM1CQ96JP0 617 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 MYRFLQ96LU7 910 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 C19orf43Q9BQ61 176 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TCF25Q9BQ70 676 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TRIM56Q9BRZ2 755 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 FICDQ9BVA6 458 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TBC1D10AQ9BXI6 508 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 POLR1EQ9GZS1 481 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 C12orf65Q9H3J6 166 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 NOL6Q9H6R4 1146 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TMEM216Q9P0N5 145 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 VTI1BQ9UEU0 232 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 GGT7Q9UJ14 662 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 ACOT9Q9Y305 439 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 DOCK8Q8NF50 2099 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 C2orf16Q68DN1 1984 aa8.52□□□□□ -1.05
VTI1A-207ENST00000489357 TCF20Q9UGU0 1960 aaKnown RBP8.52□□□□□ -1.05
VTI1A-207ENST00000489357 GOLGA8QA0A0J9YX86 632 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 GOLGA8OA6NCC3 632 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 MROH6A6NGR9 719 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 A6NJY4 79 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 F5H5T6 163 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 GOLGA8NF8WBI6 632 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 G3V2L1 256 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 GYG2O15488 501 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 TLR5O60602 858 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 PRAMEF11O60813 436 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CLASP2O75122 1294 aaKnown RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 MOCS2O96007 188 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 PRKCGP05129 697 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CNPP09543 421 aaKnown RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 PSMA3P25788 255 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 NMBRP28336 390 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 LEPRP48357 1165 aaKnown RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CD151P48509 253 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 SLC12A2P55011 1212 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 AQP5P55064 265 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CDH4P55283 916 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 WNT3AP56704 352 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 DNAJB13P59910 316 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CREMQ03060 361 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 NSUN2Q08J23 767 aaKnown RBP eCLIP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 GALNT1Q10472 559 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms