RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ARHGAP25P42331 645 aa25.11■■□□□ 1.61
HMGN1-217ENST00000489072 GBE1Q04446 702 aa25.11■■□□□ 1.61
HMGN1-217ENST00000489072 SLC10A2Q12908 348 aaPredicted RBP25.11■■□□□ 1.61
HMGN1-217ENST00000489072 CAMK2BQ13554 666 aa25.11■■□□□ 1.61
HMGN1-217ENST00000489072 PDCD6IPQ8WUM4 868 aaKnown RBP25.11■■□□□ 1.61
HMGN1-217ENST00000489072 LRRN4Q8WUT4 740 aa25.11■■□□□ 1.61
HMGN1-217ENST00000489072 MAML1Q92585 1016 aa25.11■■□□□ 1.61
HMGN1-217ENST00000489072 B4GALT6Q9UBX8 382 aa25.11■■□□□ 1.61
HMGN1-217ENST00000489072 U3KQA8 63 aa25.11■■□□□ 1.61
HMGN1-217ENST00000489072 NEMP2A6NFY4 417 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 AQP9O43315 295 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 RECQL5O94762 991 aaPredicted RBP25.1■■□□□ 1.61
HMGN1-217ENST00000489072 CPP00450 1065 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 PCCBP05166 539 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 ELFN1P0C7U0 828 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 ALPPL2P10696 532 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 CDK4P11802 303 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 ILKQ13418 452 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 INPP5AQ14642 412 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 RALGPS1Q5JS13 557 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 ZFYVE27Q5T4F4 411 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 NYAP1Q6ZVC0 841 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 TMPRSS12Q86WS5 348 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 PHACTR4Q8IZ21 702 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 PLA2G15Q8NCC3 412 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 LMX1AQ8TE12 382 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 APOLD1Q96LR9 279 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 RNF157Q96PX1 679 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 INTUQ9ULD6 942 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 CSNK1G3Q9Y6M4 447 aa25.1■■□□□ 1.61
HMGN1-217ENST00000489072 C3orf70A6NLC5 250 aaPredicted RBP25.09■■□□□ 1.61
HMGN1-217ENST00000489072 MATN3O15232 486 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 GCATO75600 419 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 DAB2P98082 770 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 IHHQ14623 411 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 TCEAL1Q15170 157 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 IFI16Q16666 785 aaKnown RBP25.09■■□□□ 1.61
HMGN1-217ENST00000489072 HS1BP3Q53T59 392 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 TSGA13Q96PP4 275 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 SEMA3CQ99985 751 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 APOOQ9BUR5 198 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 RBSNQ9H1K0 784 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 APOBEC3BQ9UH17 382 aaKnown RBP25.09■■□□□ 1.61
HMGN1-217ENST00000489072 OR1A2Q9Y585 309 aa25.09■■□□□ 1.61
HMGN1-217ENST00000489072 LRRD1A4D1F6 860 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 TAF4O00268 1085 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 CKMT1AP12532 417 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 CCNCP24863 283 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 PEX5P50542 639 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 MTM1Q13496 603 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 C1orf61Q13536 156 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 PTPRRQ15256 657 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 DEFB133Q30KQ1 61 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 HES3Q5TGS1 186 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 FAM181AQ8N9Y4 354 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 BTN2A2Q8WVV5 523 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 FATE1Q969F0 183 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 LRRC61Q9BV99 259 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 DUSP23Q9BVJ7 150 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 DTLQ9NZJ0 730 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 HYOU1Q9Y4L1 999 aa25.08■■□□□ 1.61
HMGN1-217ENST00000489072 A0A1W2PQ67 120 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 PGLSO95336 258 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 NFATC4Q14934 902 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 CNGA3Q16281 694 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 PRRT3Q5FWE3 981 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 ALG1LQ6GMV1 187 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 TIGD7Q6NT04 549 aaPredicted RBP25.07■■□□□ 1.6
HMGN1-217ENST00000489072 PELI3Q8N2H9 469 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 PLD5Q8N7P1 536 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 MDM1Q8TC05 714 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 COQ10AQ96MF6 247 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 CLPBQ9H078 707 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 SPASTQ9UBP0 616 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 PHTF1Q9UMS5 762 aa25.07■■□□□ 1.6
HMGN1-217ENST00000489072 RP1P56715 2156 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 TRABD2BA6NFA1 517 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 SRRM3A6NNA2 597 aaPredicted RBP25.06■■□□□ 1.6
HMGN1-217ENST00000489072 ZNF487B1APH4 448 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 PDHA1P08559 390 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 VIPR1P32241 457 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 ZNF75DP51815 510 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 DSC2Q02487 901 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 PPARDQ03181 441 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 ITKQ08881 620 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 ACOX1Q15067 660 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 ALG11Q2TAA5 492 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 FAXCQ5TGI0 409 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 KCTD16Q68DU8 428 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 PIH1D2Q8WWB5 315 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 TSACCQ96A04 125 aaPredicted RBP25.06■■□□□ 1.6
HMGN1-217ENST00000489072 TBATAQ96M53 351 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 SLC13A1Q9BZW2 595 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 POLR1EQ9GZS1 481 aaKnown RBP25.06■■□□□ 1.6
HMGN1-217ENST00000489072 RBM22Q9NW64 420 aaKnown RBP eCLIP25.06■■□□□ 1.63e-6■■□□□ 13.5
HMGN1-217ENST00000489072 RAI2Q9Y5P3 530 aa25.06■■□□□ 1.6
HMGN1-217ENST00000489072 NPIPB15A6NHN6 443 aaPredicted RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 HEXIM1O94992 359 aaKnown RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 LCA5LO95447 670 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 KRT1P04264 644 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms