RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 FUT8Q9BYC5 575 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 PABPC3Q9H361 631 aaKnown RBP16.09■□□□□ 0.17
CLDN11-208ENST00000488989 TBC1D17Q9HA65 648 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 PLAC1Q9HBJ0 212 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 LRRC4CQ9HCJ2 640 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 MTF2Q9Y483 593 aaPredicted RBP16.09■□□□□ 0.17
CLDN11-208ENST00000488989 SPO11Q9Y5K1 396 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 TRIOO75962 3097 aa16.08■□□□□ 0.17
CLDN11-208ENST00000488989 HEATR9A2RTY3 570 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 FAM170BA6NMN3 283 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 C16orf96A6NNT2 1141 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 UPK3BL1B0FP48 263 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 UPK3BL2E5RIL1 263 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 RIPK2O43353 540 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 LDB2O43679 373 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 RNASEH1O60930 286 aaKnown RBP16.08■□□□□ 0.16
CLDN11-208ENST00000488989 SPAG6O75602 509 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 USP1O94782 785 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 ADH1BP00325 375 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 IL1BP01584 269 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 ABHD2P08910 425 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 PGAM1P18669 254 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 GPX6P59796 221 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 FRG1Q14331 258 aaKnown RBP16.08■□□□□ 0.16
CLDN11-208ENST00000488989 CST6Q15828 149 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 CDKN3Q16667 212 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 KYNUQ16719 465 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 UGP2Q16851 508 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 HP1BP3Q5SSJ5 553 aaPredicted RBP16.08■□□□□ 0.16
CLDN11-208ENST00000488989 CFAP58Q5T655 872 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 ZNF776Q68DI1 518 aaPredicted RBP16.08■□□□□ 0.16
CLDN11-208ENST00000488989 PARS2Q7L3T8 475 aaKnown RBP16.08■□□□□ 0.16
CLDN11-208ENST00000488989 NLRP9Q7RTR0 991 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 MMAAQ8IVH4 418 aaKnown RBP16.08■□□□□ 0.16
CLDN11-208ENST00000488989 TTC30BQ8N4P2 665 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 PPHLN1Q8NEY8 458 aaKnown RBP16.08■□□□□ 0.16
CLDN11-208ENST00000488989 MDGA1Q8NFP4 955 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 FAM131CQ96AQ9 280 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 CLDN23Q96B33 292 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 HDAC8Q9BY41 377 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 SAMD15Q9P1V8 674 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 ZC3H7BQ9UGR2 993 aaKnown RBP16.08■□□□□ 0.16
CLDN11-208ENST00000488989 MAD1L1Q9Y6D9 718 aa16.08■□□□□ 0.16
CLDN11-208ENST00000488989 KPNA3O00505 521 aaPredicted RBP16.07■□□□□ 0.16
CLDN11-208ENST00000488989 PRKCGP05129 697 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 C5AR1P21730 350 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 NFKBIAP25963 317 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 HNF1BP35680 557 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 HSD17B3P37058 310 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 METAP1P53582 386 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 RPS14P62263 151 aaKnown RBP16.07■□□□□ 0.16
CLDN11-208ENST00000488989 ACVR1Q04771 509 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 GAS6Q14393 721 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 UBXN2BQ14CS0 331 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 TAF1AQ15573 450 aaPredicted RBP16.07■□□□□ 0.16
CLDN11-208ENST00000488989 CRY1Q16526 586 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 ANKRD20A4Q4UJ75 823 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 SPANXN3Q5MJ09 141 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 TSTD2Q5T7W7 516 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 TMEM92Q6UXU6 159 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 UNC5AQ6ZN44 842 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 Q6ZS52 159 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 USP45Q70EL2 814 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 CYS1Q717R9 158 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 SYT13Q7L8C5 426 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 PALM2Q8IXS6 379 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 PJA1Q8NG27 643 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 BLOC1S5Q8TDH9 187 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 NECAB3Q96P71 396 aaPredicted RBP16.07■□□□□ 0.16
CLDN11-208ENST00000488989 SMIM14Q96QK8 99 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 FOXQ1Q9C009 403 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 MKRN2Q9H000 416 aaKnown RBP16.07■□□□□ 0.16
CLDN11-208ENST00000488989 CHRAC1Q9NRG0 131 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 TREX1Q9NSU2 369 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLDN11-208ENST00000488989 SCML1Q9UN30 329 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 ZNF711Q9Y462 761 aa16.07■□□□□ 0.16
CLDN11-208ENST00000488989 TECTAO75443 2155 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 ZCWPW2A0A1B0GU75 182 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 ATG13O75143 517 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 ALDH1A2O94788 518 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 CRTAMO95727 393 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 POLBP06746 335 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 ALPIP09923 528 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 PIRTP0C851 137 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 CTPS1P17812 591 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 SSTR1P30872 391 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 DRD3P35462 400 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
CLDN11-208ENST00000488989 PSMD8P48556 350 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 PDE1BQ01064 536 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 ZBTB16Q05516 673 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 SIGLEC14Q08ET2 396 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 UBAP2Q5T6F2 1119 aaKnown RBP16.06■□□□□ 0.16
CLDN11-208ENST00000488989 DENND2CQ68D51 928 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 CASC4Q6P4E1 433 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 ERN2Q76MJ5 926 aaKnown RBP16.06■□□□□ 0.16
CLDN11-208ENST00000488989 GLT6D1Q7Z4J2 308 aa16.06■□□□□ 0.16
CLDN11-208ENST00000488989 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLDN11-208ENST00000488989 GSDMBQ8TAX9 411 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms