RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 METTL18O95568 372 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 EPOP01588 193 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 MMP2P08253 660 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TBC1D3HP0C7X1 549 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 CTAGE8P0CG41 777 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 ADRB3P13945 408 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TIMP2P16035 220 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 DRD3P35462 400 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 ADCY8P40145 1251 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 VPS41P49754 854 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
SKA1-204ENST00000488454 FAM193AP78312 1265 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 BASP1P80723 227 aaKnown RBP10.36□□□□□ -0.75
SKA1-204ENST00000488454 C2orf54Q08AI8 447 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 DMWDQ09019 674 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 ELP6Q0PNE2 266 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TRAF2Q12933 501 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 GPS1Q13098 491 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 DHX34Q14147 1143 aaKnown RBP10.36□□□□□ -0.75
SKA1-204ENST00000488454 UGP2Q16851 508 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TBC1D3GQ6DHY5 549 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TBC1D3CQ6IPX1 549 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 USP45Q70EL2 814 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 PARS2Q7L3T8 475 aaKnown RBP10.36□□□□□ -0.75
SKA1-204ENST00000488454 ZNF572Q7Z3I7 529 aaPredicted RBP10.36□□□□□ -0.75
SKA1-204ENST00000488454 PRUNE1Q86TP1 453 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 CTAGE6Q86UF2 777 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 CTAGE4Q8IX94 777 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TBC1D3Q8IZP1 549 aaPredicted RBP10.36□□□□□ -0.75
SKA1-204ENST00000488454 LPCAT1Q8NF37 534 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 IPMKQ8NFU5 416 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TADA1Q96BN2 335 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 ECHDC3Q96DC8 303 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TOE1Q96GM8 510 aaKnown RBP10.36□□□□□ -0.75
SKA1-204ENST00000488454 FEM1CQ96JP0 617 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TDRD1Q9BXT4 1180 aaKnown RBP10.36□□□□□ -0.75
SKA1-204ENST00000488454 ETNK1Q9HBU6 452 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 ASIC3Q9UHC3 531 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 INVSQ9Y283 1065 aa10.36□□□□□ -0.75
SKA1-204ENST00000488454 TSPAN11A1L157 253 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 ERI2A8K979 691 aaKnown RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 TSPAN6O43657 245 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 RPP40O75818 363 aaKnown RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 PCDH8O95206 1070 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 SEMA4FO95754 770 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 NDST3O95803 873 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 IGLV3-19P01714 112 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 APRTP07741 180 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 CYP2A6P11509 494 aaPredicted RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 TDGF1P13385 188 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 METAP1P53582 386 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 SARNPP82979 210 aaKnown RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 MAP7D1Q3KQU3 841 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 FAXCQ5TGI0 409 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 NAPEPLDQ6IQ20 393 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 ZC3H14Q6PJT7 736 aaKnown RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 KDELC1Q6UW63 502 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 CEP68Q76N32 757 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 PCGF5Q86SE9 256 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 LINC00523Q86TU6 105 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 SLC25A41Q8N5S1 370 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 GLIS1Q8NBF1 620 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 OR2T34Q8NGX1 318 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 PIH1D2Q8WWB5 315 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 GAB3Q8WWW8 586 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 SLCO2A1Q92959 643 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 OXNAD1Q96HP4 312 aaPredicted RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 NSMCE3Q96MG7 304 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 SRPK1Q96SB4 655 aaKnown RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 MLPHQ9BV36 600 aaPredicted RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 FICDQ9BVA6 458 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 LRRC40Q9H9A6 602 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 PCDH12Q9NPG4 1184 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 WSB2Q9NYS7 404 aaPredicted RBP10.35□□□□□ -0.75
SKA1-204ENST00000488454 SERGEFQ9UGK8 458 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 PCDHGA2Q9Y5H1 932 aa10.35□□□□□ -0.75
SKA1-204ENST00000488454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.34□□□□□ -0.75
SKA1-204ENST00000488454 IGHV1OR15-9A0A0B4J2B8 117 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 LOC285095A0A1B0GVY8 99 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 PRR23AA6NEV1 266 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 ANKRD66B4E2M5 251 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 H0Y858 1186 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 AP3B1O00203 1094 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 NDC80O14777 642 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 TTI1O43156 1089 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 PLRG1O43660 514 aaKnown RBP10.34□□□□□ -0.75
SKA1-204ENST00000488454 AP1G1O43747 822 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 FZD6O60353 706 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 RHOBTB1O94844 696 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 AP2A1O95782 977 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 AGTP01019 485 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 PDHA1P08559 390 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 CTPS1P17812 591 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 HLA-DPA1P20036 260 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 ACSL1P33121 698 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 PTGIRP43119 386 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 GRIA4P48058 902 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 TERF1P54274 439 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 ADPRHP54922 357 aa10.34□□□□□ -0.75
SKA1-204ENST00000488454 RPS21P63220 83 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms