RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FAM90A22PA8MWA6 464 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 FAM90A12PA8MX19 464 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 FAM90A23PA8MXZ1 464 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 SMAD6O43541 496 aaKnown RBP4.53□□□□□ -1.68
ITGB1-214ENST00000488427 LCATP04180 440 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 SLC2A4P14672 509 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 HOXB6P17509 224 aaKnown RBP4.53□□□□□ -1.68
ITGB1-214ENST00000488427 CCKARP32238 428 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 PAFAH1B1P43034 410 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 PTPN9P43378 593 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 AMTP48728 403 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 CTCFP49711 727 aaPredicted RBP4.53□□□□□ -1.68
ITGB1-214ENST00000488427 HDAC4P56524 1084 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 CRYZQ08257 329 aaKnown RBP4.53□□□□□ -1.68
ITGB1-214ENST00000488427 VEPH1Q14D04 833 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 ZNF367Q7RTV3 350 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 TBC1D26Q86UD7 250 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 TRIM74Q86UV6 250 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 TRIM73Q86UV7 250 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 MIGA1Q8NAN2 632 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 ASB5Q8WWX0 329 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 APOLD1Q96LR9 279 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 WDR6Q9NNW5 1121 aaKnown RBP4.53□□□□□ -1.68
ITGB1-214ENST00000488427 NLKQ9UBE8 527 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.53□□□□□ -1.68
ITGB1-214ENST00000488427 INSL5Q9Y5Q6 135 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 ADGRL2O95490 1459 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 PRXQ9BXM0 1461 aa4.53□□□□□ -1.68
ITGB1-214ENST00000488427 PXDNQ92626 1479 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 TEX22C9J3V5 150 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 SERPINI2O75830 405 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 NDUFB4O95168 129 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 NGFRP08138 427 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 GPTP24298 496 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 ARRB2P32121 409 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 GABRB2P47870 512 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 CDH15P55291 814 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 RPP30P78346 268 aaKnown RBP4.52□□□□□ -1.69
ITGB1-214ENST00000488427 ADORA2A-AS1P86434 159 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 ECT2LQ008S8 904 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 SLC18A2Q05940 514 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 HIST2H2ACQ16777 129 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-214ENST00000488427 SERTAD4-AS1Q5TG53 156 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 KIAA1161Q6NSJ0 714 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 SLC22A25Q6T423 547 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 Q6ZSV7 163 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 TRILQ7L0X0 811 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 TADA2BQ86TJ2 420 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 TMTC1Q8IUR5 882 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 SFTPA2Q8IWL1 248 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 PRR26Q8N8Z3 221 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 MIB2Q96AX9 1013 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 ZC3HAV1LQ96H79 300 aaKnown RBP4.52□□□□□ -1.69
ITGB1-214ENST00000488427 URB1-AS1Q96HZ7 61 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 TM6SF1Q9BZW5 370 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 WASH6PQ9NQA3 447 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 TLR8Q9NR97 1041 aaKnown RBP4.52□□□□□ -1.69
ITGB1-214ENST00000488427 TMEM160Q9NX00 188 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 WWOXQ9NZC7 414 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 RAI2Q9Y5P3 530 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 PTGDR2Q9Y5Y4 395 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 QSER1Q2KHR3 1735 aa4.52□□□□□ -1.69
ITGB1-214ENST00000488427 TNRC6CQ9HCJ0 1690 aaKnown RBP4.51□□□□□ -1.69
ITGB1-214ENST00000488427 VIRMAQ69YN4 1812 aaKnown RBP4.51□□□□□ -1.69
ITGB1-214ENST00000488427 NPHP3Q7Z494 1330 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 A0A0C4DFX4 3053 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 COL14A1Q05707 1796 aaKnown RBP4.51□□□□□ -1.69
ITGB1-214ENST00000488427 IGHV4-28A0A0C4DH34 117 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 BECN2A8MW95 431 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 LDB2O43679 373 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 SLC25A17O43808 307 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 KCNJ13O60928 360 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 SOX30O94993 753 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 CBSLP0DN79 551 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 CHATP28329 748 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 C21orf33P30042 268 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-214ENST00000488427 FMO4P31512 558 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 DCTDP32321 178 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 CBSP35520 551 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 PCYT1AP49585 367 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 PEX5P50542 639 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 NR1H2P55055 460 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 ZXDBP98169 803 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 Q0VFX4 171 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 ITGADQ13349 1161 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 LPIN1Q14693 890 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 TAF11Q15544 211 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 BAK1Q16611 211 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 SLC4A8Q2Y0W8 1093 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 ZNF766Q5HY98 468 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 C17orf99Q6UX52 265 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 FAM160B2Q86V87 743 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 SPATA2LQ8IUW3 424 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-214ENST00000488427 CPOQ8IVL8 374 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 B4GALNT2Q8NHY0 566 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 NPFFR1Q9GZQ6 430 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 LMAN2LQ9H0V9 348 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 MVB12BQ9H7P6 319 aa4.51□□□□□ -1.69
ITGB1-214ENST00000488427 TMEM51Q9NW97 253 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms