RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 PCDHGC4Q9Y5F7 938 aa11.37□□□□□ -0.59
NIPAL3-207ENST00000488155 A0A1W2PQJ5 194 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 USP12O75317 370 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 RECQL5O94762 991 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 MAP3K6O95382 1288 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 GYPCP04921 128 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 CD48P09326 243 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 CASP14P31944 242 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 ABCG1P45844 678 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 RENBPP51606 427 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 SUOXP51687 545 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 ZNF135P52742 658 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 NSUN2Q08J23 767 aaKnown RBP eCLIP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 CCDC173Q0VFZ6 552 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 PIGHQ14442 188 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 RFTN1Q14699 578 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 NFATC4Q14934 902 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 ACAP1Q15027 740 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 ACOX1Q15067 660 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 PTPRRQ15256 657 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 NR0B2Q15466 257 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 ALG11Q2TAA5 492 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 TMCO4Q5TGY1 634 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 CDCP2Q5VXM1 449 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 ALKBH5Q6P6C2 394 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 LIPIQ6XZB0 460 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 LRRC69Q6ZNQ3 347 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 PELI3Q8N2H9 469 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 ATPAF2Q8N5M1 289 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 LZTR1Q8N653 840 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 LRRN4Q8WUT4 740 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 ECHDC3Q96DC8 303 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 DEPDC7Q96QD5 511 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 XPO4Q9C0E2 1151 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 SUDS3Q9H7L9 328 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 MRPL40Q9NQ50 206 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 B4GALT6Q9UBX8 382 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 KLQ9UEF7 1012 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 IP6K2Q9UHH9 426 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 MOSPD1Q9UJG1 213 aa11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 BZW2Q9Y6E2 419 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-207ENST00000488155 A0A087WV48 116 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 EME2A4GXA9 379 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 TMEM202A6NGA9 273 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 LMO7DNF2Z398 122 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 MYO1FO00160 1098 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 TRAFD1O14545 582 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 TPP1O14773 563 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 MAFKO60675 156 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 RASGRP1O95267 797 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 CYP1A2P05177 515 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 GP1BAP07359 652 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 GM2AP17900 193 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 HTR1BP28222 390 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 PEX5P50542 639 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 BLKP51451 505 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 HK3P52790 923 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 SRP54P61011 504 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 AP1S1P61966 158 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 POLR2LP62875 67 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 GABREP78334 506 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 SLC25A11Q02978 314 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 ITKQ08881 620 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 C3orf38Q5JPI3 329 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 C6orf132Q5T0Z8 1188 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 FOXR1Q6PIV2 292 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 DPPA4Q7L190 304 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 CACTIN-AS1Q8N1I8 211 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 PCDH19Q8TAB3 1148 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 ZNF564Q8TBZ8 553 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 NSMCE1Q8WV22 266 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 SYN2Q92777 582 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 FGF11Q92914 225 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 GLMNQ92990 594 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 FUBP1Q96AE4 644 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 PDXPQ96GD0 296 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 WDR92Q96MX6 357 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 PSKH2Q96QS6 385 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 BOCQ9BWV1 1114 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 USP29Q9HBJ7 922 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 NOD2Q9HC29 1040 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 NT5MQ9NPB1 228 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 PADI4Q9UM07 663 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 LOC400499M0QZD8 3231 aa11.35□□□□□ -0.59
NIPAL3-207ENST00000488155 A0A0U1RQS6 177 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 GOLGA6CA6NDK9 693 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 GOLGA6BA6NDN3 693 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 TMEM110-MUSTN1A8MSY1 372 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 AGRPO00253 132 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 CACNB4O00305 520 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 TOR1BO14657 336 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 PEX11BO96011 259 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 CPP00450 1065 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 TNFP01375 233 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 GOLGA6DP0CG33 693 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 CTPS1P17812 591 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 PTMSP20962 102 aa11.34□□□□□ -0.59
NIPAL3-207ENST00000488155 SERPINB6P35237 376 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms