RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 EBNA1BP2Q99848 306 aaKnown RBP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 HINFPQ9BQA5 517 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 KDM4CQ9H3R0 1056 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDLBP-242ENST00000488013 FZD4Q9ULV1 537 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 MAD1L1Q9Y6D9 718 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 PRUNE2Q8WUY3 3088 aa11.1□□□□□ -0.63
HDLBP-242ENST00000488013 EYSQ5T1H1 3165 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 FAM237BA0A1B0GVD1 139 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 TTC24A2A3L6 582 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 CAPN8A6NHC0 703 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 H0Y858 1186 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 PSMD11O00231 422 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 AP1G1O43747 822 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 USP12O75317 370 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 ZNF217O75362 1048 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 CTSLP07711 333 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 HADHAP40939 763 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 WASP42768 502 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 MAGEA4P43358 317 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 CCR3P51677 355 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 CLCN5P51795 746 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 RPS14P62263 151 aaKnown RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 DHX9Q08211 1270 aaKnown RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 ARHGEF7Q14155 803 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 FRG1Q14331 258 aaKnown RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 TAF1AQ15573 450 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 NEK5Q6P3R8 708 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 ZNF534Q76KX8 674 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 KDELC2Q7Z4H8 507 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 CCDC25Q86WR0 208 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 ZBED8Q8IZ13 594 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 ZNF366Q8N895 744 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 TSTD1Q8NFU3 115 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 AENQ8WTP8 325 aaKnown RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 SCG3Q8WXD2 468 aaKnown RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 APOL2Q9BQE5 337 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 KIFC1Q9BW19 673 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 EPC1Q9H2F5 836 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 PABPC3Q9H361 631 aaKnown RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 ARFGAP3Q9NP61 516 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 SAYSD1Q9NPB0 183 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 CD320Q9NPF0 282 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 ZC3H7BQ9UGR2 993 aaKnown RBP11.09□□□□□ -0.63
HDLBP-242ENST00000488013 SOX13Q9UN79 622 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 PKP3Q9Y446 797 aa11.09□□□□□ -0.63
HDLBP-242ENST00000488013 NEMP1O14524 444 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 SNPHO15079 494 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 TSPAN6O43657 245 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 GJB3O75712 270 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 USP1O94782 785 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 APBB3O95704 486 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 PDHA1P08559 390 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 ADRB3P13945 408 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 TIMP2P16035 220 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 LPOP22079 712 aaPredicted RBP11.08□□□□□ -0.64
HDLBP-242ENST00000488013 MGAT1P26572 445 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 OXTRP30559 389 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 GKP32189 559 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 VIPR1P32241 457 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 HMGCLP35914 325 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 GRIA1P42261 906 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 PSMD8P48556 350 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 PMS2P54278 862 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 FZD5Q13467 585 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 GALNT3Q14435 633 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 IHHQ14623 411 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 SPANXN3Q5MJ09 141 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 FNBP1LQ5T0N5 605 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 SYCP2LQ5T4T6 812 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 GLT6D1Q7Z4J2 308 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 TMC3Q7Z5M5 1100 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 TMEM135Q86UB9 458 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 LMNTD2Q8IXW0 634 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 MREGQ8N565 214 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 DTX3LQ8TDB6 740 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 BLOC1S5Q8TDH9 187 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 GANCQ8TET4 914 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 STYXQ8WUJ0 223 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 MRGPRX1Q96LB2 322 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 SIGLEC10Q96LC7 697 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 OMDQ99983 421 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 CCDC77Q9BR77 488 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 GPR63Q9BZJ6 419 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 FOXQ1Q9C009 403 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 PPCSQ9HAB8 311 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 ZFYVE1Q9HBF4 777 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 ZDHHC4Q9NPG8 344 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 TCAF1Q9Y4C2 921 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 TEX264Q9Y6I9 313 aa11.08□□□□□ -0.64
HDLBP-242ENST00000488013 UNC80Q8N2C7 3258 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 TCRBV21S2A2A0A5A6 115 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 MROH6A6NGR9 719 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 DYNC1I1O14576 645 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 AREL1O15033 823 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 PFDN6O15212 129 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 STX7O15400 261 aaKnown RBP11.07□□□□□ -0.64
HDLBP-242ENST00000488013 AVILO75366 819 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 ABHD2P08910 425 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms