RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 LIPIQ6XZB0 460 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DPPA4Q7L190 304 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PDZD3Q86UT5 571 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ATPAF2Q8N5M1 289 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LZTR1Q8N653 840 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 KYQ8NBH2 561 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PCDH19Q8TAB3 1148 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 BTN2A2Q8WVV5 523 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 FUBP1Q96AE4 644 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ZNF599Q96NL3 588 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SPASTQ9UBP0 616 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SEPT3Q9UH03 358 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SALL4Q9UJQ4 1053 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 OR1A2Q9Y585 309 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 A0A1W2PNU3 283 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HTRA2O43464 458 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SOCS5O75159 536 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CSO75390 466 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RECQL5O94762 991 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ELFN1P0C7U0 828 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LHCGRP22888 699 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 IL4RP24394 825 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HNRNPH3P31942 346 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CASP14P31944 242 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PEX5P50542 639 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SCNN1BP51168 640 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HK3P52790 923 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 KIAA1024LP59773 190 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TPM4P67936 248 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 BCL2L1Q07817 233 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TRAF2Q12933 501 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ZNF235Q14590 738 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 INPP5AQ14642 412 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TCEA2Q15560 299 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 BOLA3Q53S33 107 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NCBP2-AS2Q69YL0 99 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ALKBH5Q6P6C2 394 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CRTC1Q6UUV9 634 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 EFL1Q7Z2Z2 1120 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ZNF564Q8TBZ8 553 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CPLX3Q8WVH0 158 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HNRNPLLQ8WVV9 542 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 IQCDQ96DY2 449 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DCBLD2Q96PD2 775 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DEPDC7Q96QD5 511 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 IL12RB2Q99665 862 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 APOOQ9BUR5 198 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PACSIN1Q9BY11 444 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SLC13A1Q9BZW2 595 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 XPO4Q9C0E2 1151 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FGF22Q9HCT0 170 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NCKIPSDQ9NZQ3 722 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RCOR3Q9P2K3 495 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 B4GALT6Q9UBX8 382 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 IP6K2Q9UHH9 426 aa11.27□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CFAP69A5D8W1 941 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TMEM202A6NGA9 273 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CPP00450 1065 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ITPKBP27987 946 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SERPINB6P35237 376 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 EIF2S3P41091 472 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ADKP55263 362 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MAXP61244 160 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PPARDQ03181 441 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GALNT2Q10471 571 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DPYSL3Q14195 570 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NR0B2Q15466 257 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CNGA3Q16281 694 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TBC1D25Q3MII6 688 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ESRP1Q6NXG1 681 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HID1Q8IV36 788 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FSTL5Q8N475 847 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ARL10Q8N8L6 244 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MAPK15Q8TD08 544 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TSACCQ96A04 125 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 COQ10AQ96MF6 247 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 WDR92Q96MX6 357 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NUDCD1Q96RS6 583 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NOD2Q9HC29 1040 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RABGEF1Q9UJ41 708 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LUC7L2Q9Y383 392 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PCDHGC4Q9Y5F7 938 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 AK5Q9Y6K8 562 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DGKBQ9Y6T7 804 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PMS2P1A4D2B8 440 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NPIPB15A6NHN6 443 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GOLGA6L19H0YKK7 550 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 YY2O15391 372 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DXOO77932 396 aaKnown RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RASGRP1O95267 797 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MPOP05164 745 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HSPA9P38646 679 aaKnown RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MMP13P45452 471 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ABCG1P45844 678 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DUSP3P51452 185 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RENBPP51606 427 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms