RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 TAF4O00268 1085 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 MATN3O15232 486 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 AQP9O43315 295 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 RECQL5O94762 991 aaPredicted RBP11.5□□□□□ -0.57
SPEN-205ENST00000487496 PGLSO95336 258 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 PCCBP05166 539 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 ELFN1P0C7U0 828 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 CKMT1AP12532 417 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 MYF5P13349 255 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 JUPP14923 745 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 GM2AP17900 193 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 PPARDQ03181 441 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 GBE1Q04446 702 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 SLC10A2Q12908 348 aaPredicted RBP11.5□□□□□ -0.57
SPEN-205ENST00000487496 CAMK2BQ13554 666 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 TCEAL1Q15170 157 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 PHACTR4Q8IZ21 702 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 RBFAQ8N0V3 343 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 FAM181AQ8N9Y4 354 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 RFFLQ8WZ73 363 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 MAML1Q92585 1016 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 TSGA13Q96PP4 275 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 SEMA3CQ99985 751 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 APOOQ9BUR5 198 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 B4GALT6Q9UBX8 382 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 APOBEC3BQ9UH17 382 aaKnown RBP11.5□□□□□ -0.57
SPEN-205ENST00000487496 INTUQ9ULD6 942 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 PHTF1Q9UMS5 762 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 OR1A2Q9Y585 309 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 U3KQA8 63 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 ASPMQ8IZT6 3477 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 FRYQ5TBA9 3013 aa11.5□□□□□ -0.57
SPEN-205ENST00000487496 TDRD6O60522 2096 aaKnown RBP11.5□□□□□ -0.57
SPEN-205ENST00000487496 GOLGA4Q13439 2230 aaKnown RBP11.5□□□□□ -0.57
SPEN-205ENST00000487496 LRRD1A4D1F6 860 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 SRRM3A6NNA2 597 aaPredicted RBP11.49□□□□□ -0.57
SPEN-205ENST00000487496 TPP1O14773 563 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 GCATO75600 419 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 CPP00450 1065 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 MX2P20592 715 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 CCNCP24863 283 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 HNF1BP35680 557 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 SLC1A1P43005 524 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 BLKP51451 505 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 E2F1Q01094 437 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 ITKQ08881 620 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 MTM1Q13496 603 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 C1orf61Q13536 156 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 NFATC4Q14934 902 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 ACOX1Q15067 660 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 IFI16Q16666 785 aaKnown RBP11.49□□□□□ -0.57
SPEN-205ENST00000487496 DEFB133Q30KQ1 61 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 PRRT3Q5FWE3 981 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 ARMC12Q5T9G4 340 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 FAXCQ5TGI0 409 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 HES3Q5TGS1 186 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 LRRC38Q5VT99 294 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 TIGD7Q6NT04 549 aaPredicted RBP11.49□□□□□ -0.57
SPEN-205ENST00000487496 ZCCHC8Q6NZY4 707 aaKnown RBP11.49□□□□□ -0.57
SPEN-205ENST00000487496 ENPP7Q6UWV6 458 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 PROSER1Q86XN7 944 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 PLA2G15Q8NCC3 412 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 MDM1Q8TC05 714 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 LRRN4Q8WUT4 740 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 FATE1Q969F0 183 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 TBATAQ96M53 351 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 IL12RB2Q99665 862 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 LRRC61Q9BV99 259 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 SLC13A1Q9BZW2 595 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 POLR1EQ9GZS1 481 aaKnown RBP11.49□□□□□ -0.57
SPEN-205ENST00000487496 CCDC86Q9H6F5 360 aaKnown RBP11.49□□□□□ -0.57
SPEN-205ENST00000487496 USP29Q9HBJ7 922 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 RBM22Q9NW64 420 aaKnown RBP eCLIP11.49□□□□□ -0.57
SPEN-205ENST00000487496 DTLQ9NZJ0 730 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 SALL4Q9UJQ4 1053 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 RAI2Q9Y5P3 530 aa11.49□□□□□ -0.57
SPEN-205ENST00000487496 C3orf70A6NLC5 250 aaPredicted RBP11.48□□□□□ -0.57
SPEN-205ENST00000487496 ZNF487B1APH4 448 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 LMO7DNF2Z398 122 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 YY2O15391 372 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 FZD6O60353 706 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 HEXIM1O94992 359 aaKnown RBP11.48□□□□□ -0.57
SPEN-205ENST00000487496 PDHA1P08559 390 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 CCNB1P14635 433 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 TSHRP16473 764 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 LHCGRP22888 699 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 NFKBIAP25963 317 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 HTR1BP28222 390 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 VIPR1P32241 457 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 MAGEA1P43355 309 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 DUSP3P51452 185 aaPredicted RBP11.48□□□□□ -0.57
SPEN-205ENST00000487496 HK3P52790 923 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 INSM1Q01101 510 aaPredicted RBP11.48□□□□□ -0.57
SPEN-205ENST00000487496 TARDBPQ13148 414 aaKnown RBP eCLIP11.48□□□□□ -0.57
SPEN-205ENST00000487496 IHHQ14623 411 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 PTPRRQ15256 657 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 CNGA3Q16281 694 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 ALG11Q2TAA5 492 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 ALG1LQ6GMV1 187 aa11.48□□□□□ -0.57
SPEN-205ENST00000487496 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms