RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 NDUFA8P51970 172 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
TRIM56-204ENST00000487252 WSCD2Q2TBF2 565 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 SYPL2Q5VXT5 272 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 SARM1Q6SZW1 724 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
TRIM56-204ENST00000487252 DCAF4L2Q8NA75 395 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 ATL2Q8NHH9 583 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 CCL4L1Q8NHW4 92 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 TMEM168Q9H0V1 697 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 SPATS2LQ9NUQ6 558 aaKnown RBP11.75□□□□□ -0.53
TRIM56-204ENST00000487252 KBTBD4Q9NVX7 518 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 HESX1Q9UBX0 185 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 FBXO2Q9UK22 296 aaPredicted RBP11.75□□□□□ -0.53
TRIM56-204ENST00000487252 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRIM56-204ENST00000487252 MAP1AP78559 2803 aaPredicted RBP11.75□□□□□ -0.53
TRIM56-204ENST00000487252 PIPSLA2A3N6 862 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 A6NCN8 305 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 PPM1DO15297 605 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 PRICKLE3O43900 615 aaPredicted RBP11.74□□□□□ -0.53
TRIM56-204ENST00000487252 FBXO21O94952 628 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 FGF1P05230 155 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 BPIP17213 487 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 CDC25BP30305 580 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 STAT6P42226 847 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 ZNF165P49910 485 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 KRTAP10-9P60411 292 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 AUHQ13825 339 aaKnown RBP11.74□□□□□ -0.53
TRIM56-204ENST00000487252 ELOAQ14241 798 aaKnown RBP11.74□□□□□ -0.53
TRIM56-204ENST00000487252 LRRC14Q15048 493 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 AGERQ15109 404 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 ZNF805Q5CZA5 627 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 CARD16Q5EG05 197 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 RESP18Q5W5W9 173 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 CDH24Q86UP0 819 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 LUZP1Q86V48 1076 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 SLC47A2Q86VL8 602 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 IQCKQ8N0W5 287 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 CISD2Q8N5K1 135 aaKnown RBP11.74□□□□□ -0.53
TRIM56-204ENST00000487252 PCDH20Q8N6Y1 951 aaKnown RBP11.74□□□□□ -0.53
TRIM56-204ENST00000487252 ATP6V0D2Q8N8Y2 350 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 ST6GALNAC3Q8NDV1 305 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 GOLGA5Q8TBA6 731 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 THAP4Q8WY91 577 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 HDAC11Q96DB2 347 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 RPRD1AQ96P16 312 aaPredicted RBP11.74□□□□□ -0.53
TRIM56-204ENST00000487252 MUC3BQ9H195 1237 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 FGF22Q9HCT0 170 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 ANO10Q9NW15 660 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 FAM13BQ9NYF5 915 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 COPG2Q9UBF2 871 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 OR1A2Q9Y585 309 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 ANKRD36A6QL64 1941 aa11.74□□□□□ -0.53
TRIM56-204ENST00000487252 A0A1B0GVL5 298 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 PIK3R2O00459 728 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 TNFRSF10CO14798 259 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 POLR1CO15160 346 aaPredicted RBP11.73□□□□□ -0.53
TRIM56-204ENST00000487252 ENDOD1O94919 500 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 ZNF202O95125 648 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 ECEL1O95672 775 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 PTMAP06454 111 aaKnown RBP11.73□□□□□ -0.53
TRIM56-204ENST00000487252 DRD2P14416 443 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 PFKFB1P16118 471 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 ZNF28P17035 718 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 ZNF75DP51815 510 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 CDH4P55283 916 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 GPLD1P80108 840 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 PPP3CAQ08209 521 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 INPP5AQ14642 412 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 PLEKHN1Q494U1 663 aaPredicted RBP11.73□□□□□ -0.53
TRIM56-204ENST00000487252 MIIPQ5JXC2 388 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 C6orf15Q6UXA7 325 aaPredicted RBP11.73□□□□□ -0.53
TRIM56-204ENST00000487252 C11orf57Q6ZUT1 292 aaPredicted RBP11.73□□□□□ -0.53
TRIM56-204ENST00000487252 RHOT1Q8IXI2 618 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 BPIFA3Q9BQP9 254 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
TRIM56-204ENST00000487252 ING2Q9H160 280 aa11.73□□□□□ -0.53
TRIM56-204ENST00000487252 SIDT1Q9NXL6 827 aaKnown RBP11.73□□□□□ -0.53
TRIM56-204ENST00000487252 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
TRIM56-204ENST00000487252 STAB1Q9NY15 2570 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 A0A0D9SEW6 157 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 FAM221AA4D161 298 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 TMEM202A6NGA9 273 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 KATNA1O75449 491 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 ZMPSTE24O75844 475 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 NADKO95544 446 aaPredicted RBP11.72□□□□□ -0.53
TRIM56-204ENST00000487252 TRUB2O95900 331 aaKnown RBP11.72□□□□□ -0.53
TRIM56-204ENST00000487252 TXLNAP40222 546 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 GCLMP48507 274 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 RPL34P49207 117 aaKnown RBP11.72□□□□□ -0.53
TRIM56-204ENST00000487252 RGS7P49802 495 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 SERPINH1P50454 418 aaKnown RBP11.72□□□□□ -0.53
TRIM56-204ENST00000487252 CCL11P51671 97 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 NDST2P52849 883 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 KIAA1024LP59773 190 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 MCCD1P59942 119 aaPredicted RBP11.72□□□□□ -0.53
TRIM56-204ENST00000487252 LAMB3Q13751 1172 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 UGT8Q16880 541 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 WDR74Q6RFH5 385 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms