RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 ZNF641Q96N77 438 aaPredicted RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 UHRF1Q96T88 793 aaPredicted RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 LGMNQ99538 433 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 PDGFDQ9GZP0 370 aaPredicted RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 REXO4Q9GZR2 422 aaKnown RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 RAB6CQ9H0N0 254 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 RPAP3Q9H6T3 665 aaPredicted RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 MAGEE1Q9HCI5 957 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 CHRAC1Q9NRG0 131 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 NSMCE4AQ9NXX6 385 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 ARHGAP28Q9P2N2 729 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 NDUFAF1Q9Y375 327 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 ARIH1Q9Y4X5 557 aaPredicted RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 C9JVG2 144 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 GSTA4O15217 222 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 SLC22A1O15245 554 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 DHX15O43143 795 aaKnown RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 JRKO75564 520 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 SEC14L2O76054 403 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 CCNE2O96020 404 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 CAPNS1P04632 268 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 NCK1P16333 377 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 KCNA2P16389 499 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 TNFSF9P41273 254 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 PTPN9P43378 593 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 GNG2P59768 71 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 PIGFQ07326 219 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 E2F2Q14209 437 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 FAM209AQ5JX71 171 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 RBM48Q5RL73 367 aaKnown RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 FAAH2Q6GMR7 532 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 NEK5Q6P3R8 708 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 ZBTB8OSQ8IWT0 167 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 FSTL5Q8N475 847 aaPredicted RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 CERS5Q8N5B7 392 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 FAM110BQ8TC76 370 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 FIG4Q92562 907 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 ZUFSPQ96AP4 578 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 ROPN1LQ96C74 230 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 FEM1CQ96JP0 617 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 NSMCE2Q96MF7 247 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 TAAR1Q96RJ0 339 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 NTPCRQ9BSD7 190 aaKnown RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 DNAI2Q9GZS0 605 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 TRIT1Q9H3H1 467 aaKnown RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 CPNE5Q9HCH3 593 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 AGPAT4Q9NRZ5 378 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 INTS10Q9NVR2 710 aaKnown RBP6.27□□□□□ -1.41
VPS13D-209ENST00000487188 STMN3Q9NZ72 180 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 CYTH4Q9UIA0 394 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 UBIAD1Q9Y5Z9 338 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 RAD54BQ9Y620 910 aa6.27□□□□□ -1.41
VPS13D-209ENST00000487188 A0A0J9YYE9 177 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ZSCAN5BA6NJL1 495 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 KMOO15229 486 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PARNO95453 639 aaKnown RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CPNE6O95741 557 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CRYZL1O95825 349 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 KRT6AP02538 564 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 KRT6BP04259 564 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PRKCGP05129 697 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 MAGEA3P43357 314 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 MLLT10P55197 1068 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ATP6V0D1P61421 351 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 IL5RAQ01344 420 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 GALNT2Q10471 571 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TOP3AQ13472 1001 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 LRP8Q14114 963 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 C6orf10Q5SRN2 563 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 FAM45BPQ6NSW5 357 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 APOBEC3HQ6NTF7 200 aaKnown RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 SIAH1Q8IUQ4 282 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 FAM45AQ8TCE6 357 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CEP19Q96LK0 163 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PGLYRP2Q96PD5 576 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 NODALQ96S42 347 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 HOPXQ9BPY8 73 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 SGIP1Q9BQI5 828 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 MRPL4Q9BYD3 311 aaKnown RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 OR2B2Q9GZK3 357 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 IRF2BPLQ9H1B7 796 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CHST12Q9NRB3 414 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 GMIPQ9P107 970 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 FEM1BQ9UK73 627 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PNMA8BQ9ULN7 279 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 C2CD4BA6NLJ0 364 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 BBIP1A8MTZ0 92 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ZNF99A8MXY4 864 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 DLX3O60479 287 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 FYNP06241 537 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 BMP4P12644 408 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 GFAPP14136 432 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TPH1P17752 444 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 GSTM2P28161 218 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CD40LGP29965 261 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 LEPRP48357 1165 aaKnown RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CHRNB3Q05901 458 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TRAF3Q13114 568 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CSHL1Q14406 222 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 GOLGA7BQ2TAP0 167 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms