RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ARL5CA6NH57 179 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 TMEM233B4DJY2 109 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 ALG1L2C9J202 215 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 ANHXE9PGG2 379 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 CPLX1O14810 134 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 SLC37A4O43826 429 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 TSPAN1O60635 241 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 RFPL2O75678 378 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 ERLIN2O94905 339 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 LYPLA2O95372 231 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 BAG4O95429 457 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 XRCC6P12956 609 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 LAMP2P13473 410 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 YWHABP31946 246 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 THBS4P35443 961 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 OR1G1P47890 313 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 ARFIP2P53365 341 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 TFDP1Q14186 410 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 EMC2Q15006 297 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 USP41Q3LFD5 358 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 XKR9Q5GH70 373 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 MEPCEQ7L2J0 689 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 SKAP1Q86WV1 359 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 HACE1Q8IYU2 909 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 RNF149Q8NC42 400 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 KCNG4Q8TDN1 519 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 ZNF707Q96C28 371 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 MYADMQ96S97 322 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 LXNQ9BS40 222 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 NFKBIZQ9BYH8 718 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 TM6SF1Q9BZW5 370 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 TBC1D17Q9HA65 648 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 MIOSQ9NXC5 875 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 DLGAP2Q9P1A6 1054 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 WRAP73Q9P2S5 460 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 ADAM28Q9UKQ2 775 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 SHOC2Q9UQ13 582 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 PRG3Q9Y2Y8 225 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 CYP46A1Q9Y6A2 500 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 ACACBO00763 2458 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 RALGAPA1Q6GYQ0 2036 aa4.33□□□□□ -1.72
SNRNP40-205ENST00000486941 DMDP11532 3685 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 EPG5Q9HCE0 2579 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 CNOT1A5YKK6 2376 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 DCHS1Q96JQ0 3298 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 A0A087WWL8 130 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 MARCH6O60337 910 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 CCNT1O60563 726 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 DTNBO60941 627 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 TADA2AO75478 443 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SLITRK3O94933 977 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SNUPNO95149 360 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 IL33O95760 270 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 HNRNPA1P09651 372 aaKnown RBP eCLIP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SP9P0CG40 484 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 APEHP13798 732 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 XBP1P17861 261 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 ARF4P18085 180 aaPredicted RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 LRPAP1P30533 357 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 ARL2P36404 184 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 MLH1P40692 756 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 KCNJ5P48544 419 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 STARD6P59095 220 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 MBTD1Q05BQ5 628 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 GRIK3Q13003 919 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 HTR4Q13639 388 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 CTTNQ14247 550 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 ZNF528Q3MIS6 628 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 FUT10Q6P4F1 479 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SLC27A1Q6PCB7 646 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 DCLRE1AQ6PJP8 1040 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SERPINA13PQ6UXR4 307 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 PIK3AP1Q6ZUJ8 805 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 RTL10Q7L3V2 364 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 GAS2L3Q86XJ1 694 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 PALB2Q86YC2 1186 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 TPH2Q8IWU9 490 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SLC15A4Q8N697 577 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 PIGOQ8TEQ8 1089 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 CPB2Q96IY4 423 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 AIFM3Q96NN9 605 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SIGLEC11Q96RL6 698 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 HSD17B14Q9BPX1 270 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 EIF2AQ9BY44 585 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 TRIM6Q9C030 488 aaPredicted RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 XPNPEP1Q9NQW7 623 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 ANKEF1Q9NU02 776 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 TMEM184CQ9NVA4 438 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 RGL1Q9NZL6 768 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 CA14Q9ULX7 337 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 PCDHA12Q9UN75 941 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 KCNJ14Q9UNX9 436 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 LUC7L2Q9Y383 392 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SPEF1Q9Y4P9 236 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 HES2Q9Y543 173 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 CITO14578 2027 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 PATJQ8NI35 1801 aa4.32□□□□□ -1.72
SNRNP40-205ENST00000486941 SF3B1O75533 1304 aaKnown RBP eCLIP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms